ggKbase home page

rifcsplowo2_01_scaffold_112933_16

Organism: RIFCSPLOWO2_01_FULL_Archaea_Pacearchaeota_32_9

partial RP 26 / 55 MC: 2 BSCG 5 / 51 ASCG 17 / 38 MC: 1
Location: comp(11509..11727)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FM60_9AQUI similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 68.0
  • Bit_score: 69
  • Evalue 1.20e-09
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=432331 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="Sulfurihydrogenibium yellowsto similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 68.0
  • Bit_score: 69
  • Evalue 1.70e-09
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 69.0
  • Bit_score: 67
  • Evalue 1.70e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfurihydrogenibium yellowstonense → Sulfurihydrogenibium → Aquificales → Aquificae → Aquificae → Bacteria

Sequences

DNA sequence
Length: 219
CTTAATGAAAATATTATGGTTCTTCTGGACAAACTGCCCCAAATACAAGAAGACATTTTAATTATGAGGTATGGATTAAATGGAAATAACTCAAAATCATTAAGAGAAATAGGGCAAATTCATAATTTAACACGCGAGAGAGTAAGACAAATCCAAAACGAAGCACTTGAAAGATTAAGGAGAATGCCCAGCATAAGAAAATTATTAATATTCAAATGA
PROTEIN sequence
Length: 73
LNENIMVLLDKLPQIQEDILIMRYGLNGNNSKSLREIGQIHNLTRERVRQIQNEALERLRRMPSIRKLLIFK*