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rifcsplowo2_01_scaffold_1784_11

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_41_36

near complete RP 34 / 55 MC: 5 BSCG 6 / 51 ASCG 33 / 38 MC: 3
Location: comp(7089..7775)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 232.0
  • Bit_score: 188
  • Evalue 8.10e-45
Pseudouridine synthase n=2 Tax=Caldanaerobacter subterraneus RepID=Q8R5S6_THETN similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 232.0
  • Bit_score: 188
  • Evalue 5.80e-45
RsuA2; 16S rRNA uridine-516 pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 232.0
  • Bit_score: 188
  • Evalue 1.60e-45

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Taxonomy

Caldanaerobacter subterraneus → Caldanaerobacter → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 687
ATGCCAGAAAAACACCGCGTCCAGAAGTTATTGAGTAATCGTGGCTATTGCTCTCGTAGACGAGCTGAAGAGCTCATTAAGCAGGGAAGGGTGACGGTCAATAACAAGCTCATTTCTATCGGTACGTCTGCAGCTGAAACTGATATTATCCGTGTCGATGGACAAGTTGTTAAACCGACAAAAAAAATAGTTATCGCGTTTCACAAGCCGGCTGATTGTGTGACCGCATTAACCGACAAGTTTCACAAAACAATCATGGATTATATCAATATCGATGAGCGACTGTTCCCTGTGGGAAGGCTCGATTTCAATACTTCAGGCTTGTTGCTCTTGACAAACGACGGCGATTTCGCAAATGGTGTGACTCATCCACGGTATCAAGTTATCAAAACATATGAAGCACGATGTGATACGGTGATTTCCCAGCGAATCGTTCAGCAGTTACAGCATGGAATGATTATTGATGAAAGGATTGTGAAATGCAAAGCTCGATTGGTGAATCCGAATACGATTGAATTAACGTTGCACGAAGGGAGAAAACATATTGTTAAAAAATTGCTGAAAGAATGCGGGCTTCATGTGGTTGCGCTGAAAAGAACAAAGATAGGAAATCTTGCGCTCGGTGCATTGAAGATTTGTTCGTGGAAAGTACTTGATGCCAAAGAAATTGAGATGGTGAAGGGATGA
PROTEIN sequence
Length: 229
MPEKHRVQKLLSNRGYCSRRRAEELIKQGRVTVNNKLISIGTSAAETDIIRVDGQVVKPTKKIVIAFHKPADCVTALTDKFHKTIMDYINIDERLFPVGRLDFNTSGLLLLTNDGDFANGVTHPRYQVIKTYEARCDTVISQRIVQQLQHGMIIDERIVKCKARLVNPNTIELTLHEGRKHIVKKLLKECGLHVVALKRTKIGNLALGALKICSWKVLDAKEIEMVKG*