ggKbase home page

rifcsplowo2_01_scaffold_38578_9

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_38_10

near complete RP 33 / 55 MC: 6 BSCG 8 / 51 ASCG 33 / 38 MC: 4
Location: 3276..4262

Top 3 Functional Annotations

Value Algorithm Source
Putative tRNA pseudouridine synthase B {ECO:0000313|EMBL:KKU47144.1}; Flags: Fragment;; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 317.0
  • Bit_score: 519
  • Evalue 3.70e-144
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 324.0
  • Bit_score: 408
  • Evalue 6.60e-111
putative tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 329.0
  • Bit_score: 385
  • Evalue 1.70e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWA2_46_9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGAATAGCTTATTGCCATTCGAGCAAACACAAAGAAAAATCCTGATAAGGAAGGAATCAGGAACAGATTACAAATACGGCTGCGCTCCTGAAGAAAGGAAAACAGAAGAAATAATCAATTACGGGATTGTAAGCATTGACAAGCCCAAAGGCCCCACAAGCCATCAGGTTTCTGACTATGTTCAAAAAATCCTGCATATAAGCAAGTCCGGGCATGGAGGCACGCTTGATCCTGCTGTAACAGGGGTTCTTCCAGTCGCATTAGGCAGGGGAACAAGGATAGTGCAGGCATTGCTGTCAGCTGGAAAAGAATATATTGCAATAATGCACCTGCACAAGGAAGTGGATGAAAAGAGATTAAGGGAAACAATCCAAAAGCATTTTCTCGGAAAGATAATGCAGCTCCCTCCTATAAAAAGCTCTGTGAAAAGGCAGCTGAGGCCAAGAACAATTTATTACCTAGACATCCTTGAGATTGACGGGCAGGATGTATTGTTTAAAGTAGGGACTGAAGCAGGGACTTATATCAGAAAATTGCTCCATGACCTGGGGCAAAAGCTGAAAGTAGGGGCGCATATGGCAGAGCTTAGAAGGACAAAGGCTGGCCCTTTTGACGAGTCAACTCTATTCACTTTACATGAGCTGACTGATGCTTATCATTTCTGGAAAGAGGAAGGAAACGATAAATTCCTGCGAAAAGCAATCCAGCCGGTTGAATCAGGGACAAAGCACCTTCCAAAGGTTTGGGTTTTTGACGCGACAATTGAAAGTTTATGCCATGGAACTGATTTGAAAGTGCCCGGAATAAGCAAAGTGAATGATAAAATAAGCAAGGATGATCTTGTTGCTATAATGAGCTTAAAAGGCGAGCTTGTCGCATTGGGAATTGCCCAAATGAGTTCTGAAGATATGCTGGGCGAAAAAGGGCTGGCTGTTAGAACAGATAAAGTGTTCATGGTGCCTGGAACGTATAAGATAAACCTTTAA
PROTEIN sequence
Length: 329
MNSLLPFEQTQRKILIRKESGTDYKYGCAPEERKTEEIINYGIVSIDKPKGPTSHQVSDYVQKILHISKSGHGGTLDPAVTGVLPVALGRGTRIVQALLSAGKEYIAIMHLHKEVDEKRLRETIQKHFLGKIMQLPPIKSSVKRQLRPRTIYYLDILEIDGQDVLFKVGTEAGTYIRKLLHDLGQKLKVGAHMAELRRTKAGPFDESTLFTLHELTDAYHFWKEEGNDKFLRKAIQPVESGTKHLPKVWVFDATIESLCHGTDLKVPGISKVNDKISKDDLVAIMSLKGELVALGIAQMSSEDMLGEKGLAVRTDKVFMVPGTYKINL*