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rifcsplowo2_01_scaffold_9158_9

Organism: RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10

near complete RP 45 / 55 MC: 1 BSCG 43 / 51 ASCG 10 / 38
Location: 6107..7876

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 589.0
  • Bit_score: 1144
  • Evalue 0.0
RNA polymerase sigma factor id=4489131 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 586.0
  • Bit_score: 642
  • Evalue 4.90e-181
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 581.0
  • Bit_score: 617
  • Evalue 3.70e-174

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Taxonomy

R_Elusimicrobia_54_10 → Elusimicrobia → Bacteria

Sequences

DNA sequence
Length: 1770
ATGAGCGTCCAACCCAACAACAGCGACATCCTTAAAGATCTGATCGAGCAGGGGCGCGAAAGCGGTTACCTGACTTACGAGGAAATCCACCGCCAGCTGCCCGATTCCAACATCAACAACGAAGAGCTGGACCGGCTTTATACCACGCTCCAGGAAATGGGCATTCCCGTCATCCGCAAGCAGGACGAAACCGCCGTCCTCGAGCGCCAGAGGGTGGGCGTGAGCCCGCTTATGGACACTCTGGTGCCCGAAGAAATTGAAGTCCCGGAAGCGCCCGTGGAGATGGAAGTGGACACGCAGAACTCCATCCGGATGTATCTGACGGAGATGGGCAAGGTGCCCCTGCTTCAGCGCGACCAGGAAATCAACCTGGCCAAAAACATCAAGGACAATGAAAAAACGCTCAAATGGCTGGTGCTGGAATCCCCCATTGCCATGCGCGAAATCCGCAACTGGGACACGCTCATCACCCAGGACGAAATGACTCCCAAGGAGCTCATGCCCCGCGGCCGCAAGACCAACCAGGAACTTTCCCACATGAAAAAGAAGATGCGCGAGGTGGTGAAGTTCATCACCCAGGGCGAAAAACGCATGTTGACCGCCCAGGCCAAGGCCAAGGACCGTTCCAAGTCCGACAAGAAACGGGACCATTGGCGCGGGGAAGCCGAAGCCGCCAAAAATTCCATCATCGAGAGGATCGTGAGCCTGAATTTGAACAACGAGAAGATCAAGCGGCTCACCAACAAGATCAAGACTCTGGCCCAGCGGGTGCTGGAAACAGAGGAAGAAATCCAGCGTTATGAGAAACGCTTCAAGATGACCCAGCCGGAGCTCTTCCGCGTGTATGAACAGGCCAAACGCGGCAAAATTTCAGCGAGCGTTTTCAAGAAAGCCACGGGATACACGCTCACGGGCATTGAATCCTCCATGATCAACCTGGAAAACATCGTGGACAAGCACCGCCGCATGGTATCGTCCCTGCCGGAAGGCAAATCGAGCCTGCTGGACCGCTATAAAAAAATCAAGGACCTTGAAGAAACGATTCTTAAAAACAAGGTGGAGCTCATCAAGGCCAATCTGCGTCTGGTGGTGTCCATCGCCAAAAAACACGTGGGCGGCTCGTCGCTCGAGCTCACGGACCTGATTCAGGAAGGGGGCCTCGGGCTGATCAAGGCCGTGGAAAAATTCGAATGGAAGCGGGGATTCAAGTTCTCCACTTACGCCACCTGGTGGATCCGCCAGTCCATCAACCGCGCCATTGCGGATCAGTCCCGCACCATCCGCATTCCGGTGCACATGAAAGAAATCATCTCCAAAATGGGCAAGATCGCGCGCAAGAGCCGCCAGGATTTCGGCCGCGAACCGCATGTTGAGGAATATTCCAAAACGCTCCGGCTTTCCACGGACAAGGTGCGCTCCATCCTGAAAATCATGCAGGATCCCATCTCTCTCACCACGCCCATCGGCGAGGACGAGGATTCTTATCTTGAGGATTTCATTGAAGACAAGCAGGGGCCTTCGCCGTCACGCTCGGCCGTGGAGTTTTTGAAGCGGCAGGAAATTGAAGGCGTTCTGGCCACGCTGTCCACCCGGGAAGCCGAGATCATCCGCATGCGCTTTGGCATCAGCACGGGATACCCGCGCACCCTGGAAGATGTGGGCAAGATCTTCAACGTCACGCGCGAGCGCGTGCGGCAGATTGAAGCCAAAGCCATCCGCAAGATGCGGCACCCGTCCAGAAGTAAGAGGTTAAGGGAGTATTTGGAGTAG
PROTEIN sequence
Length: 590
MSVQPNNSDILKDLIEQGRESGYLTYEEIHRQLPDSNINNEELDRLYTTLQEMGIPVIRKQDETAVLERQRVGVSPLMDTLVPEEIEVPEAPVEMEVDTQNSIRMYLTEMGKVPLLQRDQEINLAKNIKDNEKTLKWLVLESPIAMREIRNWDTLITQDEMTPKELMPRGRKTNQELSHMKKKMREVVKFITQGEKRMLTAQAKAKDRSKSDKKRDHWRGEAEAAKNSIIERIVSLNLNNEKIKRLTNKIKTLAQRVLETEEEIQRYEKRFKMTQPELFRVYEQAKRGKISASVFKKATGYTLTGIESSMINLENIVDKHRRMVSSLPEGKSSLLDRYKKIKDLEETILKNKVELIKANLRLVVSIAKKHVGGSSLELTDLIQEGGLGLIKAVEKFEWKRGFKFSTYATWWIRQSINRAIADQSRTIRIPVHMKEIISKMGKIARKSRQDFGREPHVEEYSKTLRLSTDKVRSILKIMQDPISLTTPIGEDEDSYLEDFIEDKQGPSPSRSAVEFLKRQEIEGVLATLSTREAEIIRMRFGISTGYPRTLEDVGKIFNVTRERVRQIEAKAIRKMRHPSRSKRLREYLE*