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rifcsplowo2_01_scaffold_13367_29

Organism: RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10

near complete RP 45 / 55 MC: 1 BSCG 43 / 51 ASCG 10 / 38
Location: 23489..24076

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 397
  • Evalue 1.30e-107
30S ribosomal protein S4 id=2052071 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 197.0
  • Bit_score: 200
  • Evalue 1.60e-48
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 196.0
  • Bit_score: 199
  • Evalue 7.90e-49

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Taxonomy

R_Elusimicrobia_54_10 → Elusimicrobia → Bacteria

Sequences

DNA sequence
Length: 588
GTGAAGCTTTTCTTGAAGGGCGACAAATGTTTTACCAAGTGCGTGCTGGACAAGAGAAAGGGCGTTCCCGGCCAGCACGGCAAGGCTTTCTCCGGCGGGAGAAAAGCGTCTGAATACAACAAACGCCTCCGCGAAAAGCAGAAACTCCGCCGCATGATCGGCGTAGCCGAAAAGCCGTTCCGCCGCTATTTCGCGATTGCCGCCGCCAAGCCGGGACTGACAGGTGAAAACCTGCTCAGAATCCTGGAAACCCGGCTGGACAATGTGACCCAGCGTCTGGGCTTTGCCATCTCCAAAGTGGCTGCGCGCCAAATGGTGCTTCACGGACACATGCTGGTGAACGGCAAAGCGGTGAACGTGCCGTCCTATCAGCTCAAGCCCGGAGACGCGGTTTCCATGAAGGAAGGATCCCGGGCCAACGCGCTGTATGCGCGGTGGTGGGAGCAGACTCACAAGACCTCGGTGTTCCCGTCCTGGCTGGAATCCAATGTCGCCGCCTGGAGCGGCCAGGTGAAAACTTGGCCTGCCCGTGACGAAATGTCTTTCCCCGTCAACGAGCAGCTGATCGTGGAACTGTACTCTAAATAA
PROTEIN sequence
Length: 196
VKLFLKGDKCFTKCVLDKRKGVPGQHGKAFSGGRKASEYNKRLREKQKLRRMIGVAEKPFRRYFAIAAAKPGLTGENLLRILETRLDNVTQRLGFAISKVAARQMVLHGHMLVNGKAVNVPSYQLKPGDAVSMKEGSRANALYARWWEQTHKTSVFPSWLESNVAAWSGQVKTWPARDEMSFPVNEQLIVELYSK*