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rifcsphigho2_02_scaffold_318_40

Organism: RIFCSPHIGHO2_02_FULL_Fluviicola_43_260

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 12 / 38
Location: comp(43932..44498)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-E factor heat shock and oxidative stress n=1 Tax=Kordia algicida OT-1 RepID=A9E3Y0_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 32.8
  • Coverage: 174.0
  • Bit_score: 122
  • Evalue 4.20e-25
ECF subfamily RNA polymerase sigma-24 subunit Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 369
  • Evalue 2.10e-99
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 182.0
  • Bit_score: 122
  • Evalue 1.50e-25

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Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGACTGATCAGGAAATCATCTCATCCATACGCAAAGGCGAGCGCGAACAAGCGATTCGGTTTTTGTACCAGGAGTTTCCTAAAATCAAAGCATTGATTCTCAAAAGTGGCTTGAATGAAGTGGTGGCGAAAGAAGTGTTCAATGACAGTTTGTTGCTCCTGATCGAAAAATTACAGGACCCGAATTTTGAATTGACATCGAAGCTAACGACTTATTTGTATGGGATCAATCGGTTTATGGTGAAAAACGAAATGCGCCGGCAAAACAAAACGGCTTACGAATTGGAGTGGAGTGACACGCTTATTATTTCGGATGCTGATTTGGGCTACGATGTTGAAAAGGAAGAGCGTTTGAGTCAACTGGATAAGATTCTTAGCCAGGTTTCCGAAAAATGCCGTCAGATATTTGAATTATTTTATTTCCGAAAACAATCCATGGAACATATTTCCAAGACCTTGAATTATTCAAGCGTCAACTCGGCGAAAACGCAGAAATACAAGTGTATTGAGCAAGCGTACCAATTGGCCCAAAAGCATGTTTCTCACCCTGAATCGTTATTACCATGA
PROTEIN sequence
Length: 189
MTDQEIISSIRKGEREQAIRFLYQEFPKIKALILKSGLNEVVAKEVFNDSLLLLIEKLQDPNFELTSKLTTYLYGINRFMVKNEMRRQNKTAYELEWSDTLIISDADLGYDVEKEERLSQLDKILSQVSEKCRQIFELFYFRKQSMEHISKTLNYSSVNSAKTQKYKCIEQAYQLAQKHVSHPESLLP*