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rifcsphigho2_02_scaffold_901_46

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_45_17

near complete RP 35 / 55 MC: 2 BSCG 11 / 51 ASCG 34 / 38 MC: 2
Location: 40881..41726

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V8Q1_THELD similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 277.0
  • Bit_score: 161
  • Evalue 1.20e-36
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 280.0
  • Bit_score: 170
  • Evalue 2.80e-39
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 277.0
  • Bit_score: 161
  • Evalue 3.40e-37

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGGATCATGATTGTATTCCAGATGCAACAGATATATCTGCTTATCTTCGTGTTGTTGGGTCATATCCTCTTCTCACTAGAGAACAAGAGACTGATCTTGGAAAAAGAATTGAAGAAAGGGATGAATCTGCCAGGACAACTTTGATCCAATCAAACCTTCGCCTTGTAGTTTCTCTCGCTAGCAAGCGTGTGTATAATGGCCTCCTCCCTGATGCTGTCCAGGAAGGAAATATTGGATTAATACAAGCTGCTGGAATCTATAATTGGAGGTTTGGAACACGTTTTTCTACTATTGCAACGCCATATATCCTCAATCCCCTGCGGCGTTTTGTAAAAAGAGAACGATCACCTCTTGTCTACATTCCTGAGAGGGAGATCACTGCGTTTTCACGATACCAAGAAGCCCTGGAAATGTCAACGCTCCGGGGAGATGCAGATCCTCAAAGAAGTGTATCACTTGATCTAAATCTTACCCCTGATCAGCTGGAGAGATTTCAAACCTATTATGGGTTTTTGTATCCAGAATCCCTGGATGTGCCAATCGATGAGGATTACGAATCTCTTTATGGATCGATCGCGTGTTCTCTTGTTCCAATCCCTGATCAGGTTGCATGCACTGGGCGGCAAGACATCATCAGATCATATGTCGGTTTACTCGAAGAACGTCAGCAGGAGGTCATCAAGCTTCGCTTTGGTCTCGATGATGGAATAGAGTGGACACTAGAGGATATTGGTAGAAGATTTAATCTCTCAAGACAGAGAATTGAGCAGATTCAGACTGATGGATTAAAACGGCTTCGAAGGTTGGTCACCGCAGATAGGCTAAGCTTGGGAGACATCCTCTAA
PROTEIN sequence
Length: 282
MDHDCIPDATDISAYLRVVGSYPLLTREQETDLGKRIEERDESARTTLIQSNLRLVVSLASKRVYNGLLPDAVQEGNIGLIQAAGIYNWRFGTRFSTIATPYILNPLRRFVKRERSPLVYIPEREITAFSRYQEALEMSTLRGDADPQRSVSLDLNLTPDQLERFQTYYGFLYPESLDVPIDEDYESLYGSIACSLVPIPDQVACTGRQDIIRSYVGLLEERQQEVIKLRFGLDDGIEWTLEDIGRRFNLSRQRIEQIQTDGLKRLRRLVTADRLSLGDIL*