ggKbase home page

rifcsphigho2_02_scaffold_1115_34

Organism: RIFCSPHIGHO2_02_FULL_Aenigmarchaeota_36_49

near complete RP 32 / 55 MC: 5 BSCG 18 / 51 ASCG 35 / 38
Location: 25833..28505

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated helicase Cas3 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WX5_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 31.0
  • Coverage: 938.0
  • Bit_score: 360
  • Evalue 5.60e-96
CRISPR-associated helicase Cas3 similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 938.0
  • Bit_score: 360
  • Evalue 1.60e-96
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:ABE52051.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methano similarity UNIPROT
DB: UniProtKB
  • Identity: 31.0
  • Coverage: 938.0
  • Bit_score: 360
  • Evalue 7.90e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanococcoides burtonii → Methanococcoides → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 2673
ATGACATTAGAAACTTTGATTGCATACGATGAAATATTCGCTAAAGAATTTCTTGAAAAGATATACGCTCGCAAAGATAAAGACCAGCCTGACAAATATGAAACTCTGGAAGAACATAGTATCAGAACTCTTGCAAAAGCAAATGAAATAATATCTAAACTTCAACTCGGATCTATTTTGACTAAATTAAACCATAATTTATACAAAGAATTCGAATCTATTGAAGATGAAATAACAGAAGAAGATTTTAACTCAATTATGAAAAAACTTCTTGCAACTATTATTTACTTGCATGATATAGGAAAAGTGAATAAACAATATCAAACCAAACGTCTCGGGAATTATCTGAAAGGCATTGATGGTTTTGTAGATTCTTGGCACAGTGCTTATGGACATATGCTAATAAACCAACTCTTATTTTCTGAAAGACAGAACACCATCTTTAGGAAAAGCCATAAACTTGGATTCTGCGCTATTGTGCTTACAACAATAGTTAATAGGCATCACACACCATTACTTGACATGGAGATCCCATCTACATATCATAGTAGTAGGAACATTTGGGATAATAATGTTAAACACTTAAACGATAACATAAAAGGTCTCGAAAATACATGCAAACAGTCTATTTTATTATTAGATGATTTTGATAAAAAAATCGAAAAGGATATTGAAGCCATTTATTCTGACTACTTAGAAGAGATGGGTAAAATTCCCAGTAGTATGTTCTTCATATATAAGCTATGGTACTCTATTCTTGTTCAATCGGACTGTTTTGCGGCTGAGTTGTTTTCCAAATCAGATTCAAAAATCAATTTCATTGACAAAGAACTGGCAGAAGAACTACAAAATGAATTTCATTCTAGAAAGTCGTATAACGTTGGGTTAGAAGAAAAGAAGTATCTCTTGAGTTCACCGATAGAAAATATTCAGGACATAGATGATCTTAGAACAAGAATACTCATAGAAGCATCAAAAACACTTCAAGAAACAATTAAGAAAGATGAAGAAAAAAGAATCTTTTATATAGATGTTCCAACAGGTGGCGGGAAAACGAACATATCAATAAAGCTTGCACTTGATCTCGTGAAAAGAAAAAATCTCGTTAGAATAAATTATGTGTTTCCATTCATAAACATTATAGAACAAAACCATGAAGAAATAGAAGCAACGCTTGGTCAGACGAACAAGGATACAGTATCAAAAATATATTCATTTTCAGACTGGGGTATAGAAAATGAAACAGAAGATGAGAATTTTAAACTCGGAAATCAGAGATTCTTGAATTATCCAGTAAATGTAATAACCAACGTAAATTTTTTCAATATCTTCCTCAAAAGCTCGAAAAAAGCTACAATGAAAACATTGGAACTGTGCAATAGTGTTGTAATACTCGATGAAATACAATCATTACCAAACAAAAAGTGGATTTATTTTGTGACATTGTTAAATAAAATTTCCAAATTATACAATATATATTTCATTATAATGAGTGCAACCTTACCAGACTTGAAGTTGCTGCTAAGCAAAGATGAGAAGAAAGAATTCGATTCCATTGACCTCATAGAGCAACCCGAAAGCTATGCTAAACATCGTTTGATGAAACGTGTTACTTACGAAATAAATAAAGATGCAGATCCCGAGCAGGAAATTTGTCAAATTCTTGATGTATACAAAAGGCTCCTGACCAATAGAGCTTACAAAAAAATATTGATTGTAGTTAATACAATTTCTGATAGTATAGAAATTTATAAAAAGATCGCAAAACCCAAAAGATTCAAAACGTTCCTACTCAACTCTACTACCTTACCATATAAAAGAAAAGAAATAATCAATGAAATAAAATCAGGCGTTAATGTTATCTTAGTATCCACCCAGTCTGTTGAAGCTGGAGTAGACATAGATTGTGATGTCGGTATAAGGTCTGATGCTCCCCTTGATTCTATAGAACAAATAGCAGGCAGGGTAAACAGGAATGGAAAAAAGTCAGTCGAATTGTCTAAGGTTTTTGTCGTTCCATCTAAATCGAAAAAGTATGTTTATTCTGGAGATATTCGTAATATGTATGATATATCGGGAAAGAATGGTTTAGATTGTGAAACCCTTTTGATAAACAGGGATTTCAGTTCCTATTATATACAAATAATGGAACGCGCTTTACAAAGAGAGGATATGACAAAAGCAAACAAAACCGATCTTTTGGAACCTATGAATAATCTTGAATTTGACAAATTAAATCAACAAGATTACATAGAATCTAGAAGTTTCTCAATTTTCTTACCAGTGAAAATACCTTTAAAATATTTTGTTAACCTCATGAACTTTATTAAAGACAATAATCTTTCAAAAAATAGTTATTTGCATGGAAATGACGTTTGGAAATTATATACAAGTAATAAATATGAAAATTTAATCAGAGGTAATGACCTTAAAAAACTTCAGTTGATAGTACAAAACTTCTGCGTTAATCTCGTCGAACCACGAAGTTCAAAAAGTAGTTTGAGTTTTAGAGAATTTATAAAAAATACTTTGAAATTTAATTCCGAAAATGATGAAAGTATTCTGATTGCGGATGAGAACTTTATAAATAAATATTTTGATGAGAACATTGGTTTAGATATTCAAAAACTTAAAACAGATTTCAAAGAATTAGAAGATACGAACATAATTTAA
PROTEIN sequence
Length: 891
MTLETLIAYDEIFAKEFLEKIYARKDKDQPDKYETLEEHSIRTLAKANEIISKLQLGSILTKLNHNLYKEFESIEDEITEEDFNSIMKKLLATIIYLHDIGKVNKQYQTKRLGNYLKGIDGFVDSWHSAYGHMLINQLLFSERQNTIFRKSHKLGFCAIVLTTIVNRHHTPLLDMEIPSTYHSSRNIWDNNVKHLNDNIKGLENTCKQSILLLDDFDKKIEKDIEAIYSDYLEEMGKIPSSMFFIYKLWYSILVQSDCFAAELFSKSDSKINFIDKELAEELQNEFHSRKSYNVGLEEKKYLLSSPIENIQDIDDLRTRILIEASKTLQETIKKDEEKRIFYIDVPTGGGKTNISIKLALDLVKRKNLVRINYVFPFINIIEQNHEEIEATLGQTNKDTVSKIYSFSDWGIENETEDENFKLGNQRFLNYPVNVITNVNFFNIFLKSSKKATMKTLELCNSVVILDEIQSLPNKKWIYFVTLLNKISKLYNIYFIIMSATLPDLKLLLSKDEKKEFDSIDLIEQPESYAKHRLMKRVTYEINKDADPEQEICQILDVYKRLLTNRAYKKILIVVNTISDSIEIYKKIAKPKRFKTFLLNSTTLPYKRKEIINEIKSGVNVILVSTQSVEAGVDIDCDVGIRSDAPLDSIEQIAGRVNRNGKKSVELSKVFVVPSKSKKYVYSGDIRNMYDISGKNGLDCETLLINRDFSSYYIQIMERALQREDMTKANKTDLLEPMNNLEFDKLNQQDYIESRSFSIFLPVKIPLKYFVNLMNFIKDNNLSKNSYLHGNDVWKLYTSNKYENLIRGNDLKKLQLIVQNFCVNLVEPRSSKSSLSFREFIKNTLKFNSENDESILIADENFINKYFDENIGLDIQKLKTDFKELEDTNII*