ggKbase home page

rifcsphigho2_02_scaffold_3549_5

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_35_18

near complete RP 40 / 55 MC: 6 BSCG 15 / 51 ASCG 33 / 38 MC: 4
Location: comp(2097..2717)

Top 3 Functional Annotations

Value Algorithm Source
16S RNA G1207 methylase RsmC n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DNJ8_9CHRO similarity UNIREF
DB: UNIREF100
  • Identity: 31.9
  • Coverage: 207.0
  • Bit_score: 111
  • Evalue 1.40e-21
type 12 methyltransferase Tax=RIFCSPLOWO2_02_FULL_OP11_Roizmanbacteria_38_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 32.8
  • Coverage: 201.0
  • Bit_score: 121
  • Evalue 1.90e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OP11_Roizmanbacteria_38_10 → Roizmannbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 621
ATGGAAGAGAAAATCTGGGAGCTTATCTCGCTCTATAGCAGGCTGGCGTCCAAGTTATATATTTGCCTTAAATGCAAACTTACTCCAATAGATAAACTTAGCAGTTCTATCCCCAAAGAATGTTCTATACTCGATGTTGGCTCTGGAAATGGGATGTATAGCATTTATCTCTACCTCAAATCCAATAAGAGAAGAATATTAGGAATTGATAATGACAAAAAAAGAATTGATTATGCAAATAGAATAGCCCAAAATATAGCAAATGTTAAGTTTAAAACTCTTGACCTAAACAAAAATTATAACCTTTTAAAATGTGATGTGTACTTGATAAATGATGTTCTGCACCATATTTCCGATAACAACAAAATAAAGCTGCTTAAAAAAATCTATTTGAAAATACCGCGCAACGGAATTTTAGTAATAAAAGACATGCACACTAGAAATAAGATCAAGTTTGCACTAAACTATCTAAATGATAAAATAATGACCTCAAATAAGAAGCTGTTTTTTATAAGTGAACAAAAATTAATTGAATCATTAAGGAAAATAGGTTTTAAAGTCAGATATAAAGAAATCAATGGATACTTGTTCCCCCATATTTTGTATTTATGTAAAAAATAA
PROTEIN sequence
Length: 207
MEEKIWELISLYSRLASKLYICLKCKLTPIDKLSSSIPKECSILDVGSGNGMYSIYLYLKSNKRRILGIDNDKKRIDYANRIAQNIANVKFKTLDLNKNYNLLKCDVYLINDVLHHISDNNKIKLLKKIYLKIPRNGILVIKDMHTRNKIKFALNYLNDKIMTSNKKLFFISEQKLIESLRKIGFKVRYKEINGYLFPHILYLCKK*