ggKbase home page

rifcsphigho2_02_scaffold_5188_19

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_35_18

near complete RP 40 / 55 MC: 6 BSCG 15 / 51 ASCG 33 / 38 MC: 4
Location: comp(16595..17458)

Top 3 Functional Annotations

Value Algorithm Source
Putative HTH-type transcriptional regulatory protein Metin_1036 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSZ1_METIM similarity UNIREF
DB: UNIREF100
  • Identity: 30.3
  • Coverage: 304.0
  • Bit_score: 150
  • Evalue 2.90e-33
XRE family transcriptional regulator; K07728 putative transcriptional regulator Tax=CG_Woesearch_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 287.0
  • Bit_score: 369
  • Evalue 4.20e-99
transcriptional regulator, XRE family similarity KEGG
DB: KEGG
  • Identity: 30.3
  • Coverage: 304.0
  • Bit_score: 150
  • Evalue 8.10e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_02 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 864
ATGAAAAGTAATCTTATTGACAGATTAGGGATGTTTCTTCTTAAGGATGGATTTACAGTTAAGAGCCTTACAAGGATCTGCTTTGATTTGCTTGCAAGGAAGCATGATAAGATTCTTTTGATAAAAGTTCTAGAGGATGCTAATGCTGTAACTAAGGAGTATACAGATGCAATGAATACTATCTCTTCTTATATAGGTGCCATACCCATTATAATTGCAGAAAAAGCAGGGAATAAGCTTGAAGATAATGTTTTGTATACAAGATTTAATTTATACACATTAAATTTCACTACATTTGTCAATTCTATTAAAAATAAGTTTCCTTTTGTTAAAAGAACACAAGCGGGCTTTACTGCTTCAATAGCTGGCGACAAGCTCAGGAAGAAAAGGGAGGAGCTGGGCTACTCATTAAATTACCTGTCAAAAAAGGTAGGAGTCACAAGCAGGATGATAGACAGATATGAGAAAGGGGATTCTGAAATAACAATAAACAAGGCTATGAAAATTTATGATATTTTTGGGCATCAGGTATTCAATGAAATAAATATCTTCTCAGGATATAAGAAAATAGAAAGCAGGGATAACTCTGATTTTTCAAAAAAATATATTACGCTGGGTTTTGAAGCCTCTGACACTAAAAAAAGCCCTTTTGATGTGATAGCAAAGAAGGATAATGAGCTGATACTCACAAAGGTAGGAGACAAGGCAAGGCCTGATTTTCCATCGCTGTCAAAGCTGTTAGATGCAGATAACCTGGTTATTTTCAAAAAGAAAAAGCCAAAAGATATTCCTGCTGTTACAAAAAAAGAATTTCTTGAATTTGAGAAAGCAAATGAGCTGATAAAGTTTTTGAAGGAATTTTAA
PROTEIN sequence
Length: 288
MKSNLIDRLGMFLLKDGFTVKSLTRICFDLLARKHDKILLIKVLEDANAVTKEYTDAMNTISSYIGAIPIIIAEKAGNKLEDNVLYTRFNLYTLNFTTFVNSIKNKFPFVKRTQAGFTASIAGDKLRKKREELGYSLNYLSKKVGVTSRMIDRYEKGDSEITINKAMKIYDIFGHQVFNEINIFSGYKKIESRDNSDFSKKYITLGFEASDTKKSPFDVIAKKDNELILTKVGDKARPDFPSLSKLLDADNLVIFKKKKPKDIPAVTKKEFLEFEKANELIKFLKEF*