ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

rifcsphigho2_02_scaffold_5188_22

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_35_18

near complete RP 40 / 55 MC: 6 BSCG 15 / 51 ASCG 33 / 38 MC: 4
Location: 19226..19900

Top 3 Functional Annotations

Value Algorithm Source
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=5043665 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 225.0
  • Bit_score: 235
  • Evalue 4.00e-59
Marine sediment metagenome DNA, contig: S01H1_S20459 {ECO:0000313|EMBL:GAG16317.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 185.0
  • Bit_score: 305
  • Evalue 5.80e-80
Peptidyl-prolyl cis-trans isomerase similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 209.0
  • Bit_score: 204
  • Evalue 2.80e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 675
ATGACAATAGTTTTAAAAAAAGATTTTGTGGAAATAGAGTATACTGGCAAACTTAAAGACGAAAATATAGTTTTTGATACAACTGATGAGAAAGTTGCCAAAGAAAACAATCTGCACGGCCATAATAATTACGGTCCTGTTATAATCTGCGTTGGTGAAGAGCAAATACTGAAAGGTATTGACAAGCACCTTGAAGGGAAAGATGTAGGAAAAGAATATGACATTGAAATAAAGCCGGAAGACGCTTTTGGCAGCAAAAATGCAAAACTTATCCAGATGATTCCTACAAATAAATTCAAGCAGCAAAATATACATCCAATGCCTGGCCTGCAGGTTAATATTGACGGCTTGCTGGGAACAGTAAAAACAGTATCTGGCGGAAGGACTTTAGTGGATTTTAACCACCCATTGGCGGGAAAAGAGCTTTCCTATAAAATAAGAATCAATAAAAAAATAACAGACGATAATGAAAAGTTGTCTGGCTACTTAAAACTAAGCCTCGGCACAAAAGATGTAAAAACAGAAATAAGTAATAACAACGCAAAAATAACCTTAAAAATGGAAATACCCAAGGAAGCGCATGAAACACTAAGCAAAAAAATAACCGAGCTTATTCCAGCCATAAAAAAGGTCGAATTTACTATTGCAAAAGACTCAAAAAAACAAATAGTTTAA
PROTEIN sequence
Length: 225
MTIVLKKDFVEIEYTGKLKDENIVFDTTDEKVAKENNLHGHNNYGPVIICVGEEQILKGIDKHLEGKDVGKEYDIEIKPEDAFGSKNAKLIQMIPTNKFKQQNIHPMPGLQVNIDGLLGTVKTVSGGRTLVDFNHPLAGKELSYKIRINKKITDDNEKLSGYLKLSLGTKDVKTEISNNNAKITLKMEIPKEAHETLSKKITELIPAIKKVEFTIAKDSKKQIV*