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rifcsphigho2_02_scaffold_11937_7

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_29_10

near complete RP 38 / 55 MC: 6 BSCG 15 / 51 MC: 1 ASCG 31 / 38
Location: comp(3758..4729)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 329.0
  • Bit_score: 354
  • Evalue 1.10e-94
tRNA pseudouridine13 synthase {ECO:0000313|EMBL:KHO53366.1}; EC=5.4.99.27 {ECO:0000313|EMBL:KHO53366.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 329.0
  • Bit_score: 354
  • Evalue 1.60e-94
tRNA pseudouridine synthase D TruD similarity KEGG
DB: KEGG
  • Identity: 31.2
  • Coverage: 330.0
  • Bit_score: 129
  • Evalue 1.70e-27

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Taxonomy

archaeon GW2011_AR18 → Archaea

Sequences

DNA sequence
Length: 972
ATGCAACTAAAAACCCTTCCTGAAGATTTTATTGTAGAAGAAATTTTAAACTTGAATCTAGAAAAAGAAAGACAAGATTATTCTATAGCAAGATTAACAAAGAAGGGATGGGACCATTTTAAACTAATCCAAAAGATTTCAAAAATATTAAACCTAAAACCTAAGTTCATAGGTTATGCAGGAATTAAAGATAAACAAGCTATAACTACACAATATATTTCATTTTACAAAGTTTCAAAAGAAAAAATAAATAAAATAAAAATCCAAGATTTTTCTCTAGAGTTCTTAGGTTATTCAAAAGAAAGAATCAATCTAGGAGATTTAAAAGGAAATAATTTCAAAATAATTGTAAGAAATTTAACCAAAAAAGTTGATATTCCTAAAGATATTCAAATAGAAAATTATTTTGATGATCAAAGATTTGGAAAATTAAATAATACCCATTTAATAGGAAAATCAATAATAAAAAAAGACTTTAAAGAAACCTGCAAATTATTAGATCTAGATGTTAATAAAGATTACATTAATGAAATTCAGAAACAACCAAAAAAATTATTAAAATTTTACATCTCTGCTTATCAATCCTATTTATGGAATGAAACATTAAAAAGTATAATATCAAAAAAAGAGTTTACAAAAAAAGATTACTCAATAGGAGAGTTATACTTTTCTAATATTAAATTAAAAAATTTTAAGCTTCCATTAGTCAGCTTTGATACAAAAAAACAAAGAGAATTAGATAGGATTTTAGAAAAAGAAAAAATTACTAGATCTGATTTTATTACTAGGCAATTTCCAGATTTAGTTTCAGAATCTAAGGAAAGGGATGCATTAGTCAATGTAAAAGAGATAAGATCAAAATATTCGGAAGAGGATATAAATAAATTTAAGTTGGAATTAGAATTTTATCTTCCTAAAGGCTCTTATGCAACAATCCTAATTAAGAAGTTGTCTATTCTAATTTATAACTAA
PROTEIN sequence
Length: 324
MQLKTLPEDFIVEEILNLNLEKERQDYSIARLTKKGWDHFKLIQKISKILNLKPKFIGYAGIKDKQAITTQYISFYKVSKEKINKIKIQDFSLEFLGYSKERINLGDLKGNNFKIIVRNLTKKVDIPKDIQIENYFDDQRFGKLNNTHLIGKSIIKKDFKETCKLLDLDVNKDYINEIQKQPKKLLKFYISAYQSYLWNETLKSIISKKEFTKKDYSIGELYFSNIKLKNFKLPLVSFDTKKQRELDRILEKEKITRSDFITRQFPDLVSESKERDALVNVKEIRSKYSEEDINKFKLELEFYLPKGSYATILIKKLSILIYN*