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This organism can only be binned in the context of its binning project GWC1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

rifcsphigho2_02_scaffold_11937_11

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_29_10

near complete RP 38 / 55 MC: 6 BSCG 15 / 51 MC: 1 ASCG 31 / 38
Location: 7082..7300

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S27E; K02978 small subunit ribosomal protein S27e id=5050680 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 59.0
  • Bit_score: 86
  • Evalue 1.70e-14
30S ribosomal protein S27E; K02978 small subunit ribosomal protein S27e Tax=AR18 similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 59.0
  • Bit_score: 86
  • Evalue 2.30e-14
30S ribosomal protein S27e similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 60.0
  • Bit_score: 71
  • Evalue 1.60e-10

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Taxonomy

AR18 → Woesearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 219
GTGGGGGATTCAGAGCAAAAAAATTTGAGTTTAAGTAAAATAAAAAATGAATGTAAAACTAAATTTGTAAAGGTTCATTGTAATAAATGTAAGAATGAGCAAAATATTTTTAGTTGTGTTTCTAGTAAAGTTGAATGTTTGGTTTGCGGTGAACTTTTGGCTGAACCTTGTGGTGGAAGAAGTAAAATTAAAGGTAAAATTCTAGAGATATTAAACTAG
PROTEIN sequence
Length: 73
VGDSEQKNLSLSKIKNECKTKFVKVHCNKCKNEQNIFSCVSSKVECLVCGELLAEPCGGRSKIKGKILEILN*