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bjp_ig2157_scaffold_7804_5

Organism: BJP_Ig2157_Hor_140_2014_Rhodobacterales_69_94

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 11 / 38 MC: 1
Location: 3477..4358

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-32 factor n=1 Tax=Citreicella sp. SE45 RepID=D0D0J4_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 267.0
  • Bit_score: 422
  • Evalue 4.00e-115
RNA polymerase factor sigma-32 {ECO:0000313|EMBL:ETW11923.1}; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 267.0
  • Bit_score: 426
  • Evalue 3.00e-116
RNA polymerase sigma factor RpoH-related protein similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 267.0
  • Bit_score: 422
  • Evalue 1.10e-115

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Taxonomy

Roseivivax atlanticus → Roseivivax → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGGGCGGGGAGACGTTTTCGGATCAGACCCTTTCGCGGCGGGCAATGCGCGCTGAGTTGCTCGACGCGGAAACCGAACTGGCGCTGGCCTATGCCTGGCGCGATCATCGCGACGAGGCCGCACTGCACCGCCTGGTGACCGCGTACATGCGTCTTGCCATTTCCATGGCATCGAAGTTTCGCCGCTACGGCGCGCCGATGAACGACCTGATCCAGGAGGCGGGACTCGGCTTGATGAAGGCTGCCGACAAGTTCGACCCGGATCGCGGCGTGCGTTTCTCGACCTACGCGGTCTGGTGGATCAAGGCCTCGATACAGGACTACGTCATGCGCAACTGGTCGATGGTGCGCACCGGTTCCACCTCGTCGCAGAAGACGCTCTTCTTCAACATGCGCCGTGTGCAGGCTCGGCTCGAGCGCGAGGCGCGGGCCGCGGGCGAGACACTCGACGGCCACCAGTTGCGCGAGCGCATCGCGCAGGAGGTGGGCGTGTCGCTTGCCGACGTCGAGATGATGTCCGGGCGGCTCTCCGGGTCGGATCTGTCGCTCAACGCCACGCAGTCCGCCGACGAGGACGGGCGCGCCTGGATGGACACGATCGAGGACGATTCCCCCCAGGCGGCGGAGCGGGTGGCGCAGCATCGCGACACCGAACAGTTGCGCGAGTGGCTTGTCGGCGCGCTCTCCGCGCTCAGCGCGCGCGAGCGCTACATCGTGACCGAGCGCAAGCTGCGCGAGCCGGGGCGCACGCTCGAGAGCCTGGGCGAGGAACTGGGGCTTTCGAAGGAGCGCATCCGCCATGCGTGCTGTCTGGCACCATGCACCGCAGCCTCGCTCTTCTCGCCATCCTCTTCAGTGCTCCGGCGCTGGCAGGACCGATGA
PROTEIN sequence
Length: 294
MGGETFSDQTLSRRAMRAELLDAETELALAYAWRDHRDEAALHRLVTAYMRLAISMASKFRRYGAPMNDLIQEAGLGLMKAADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSMVRTGSTSSQKTLFFNMRRVQARLEREARAAGETLDGHQLRERIAQEVGVSLADVEMMSGRLSGSDLSLNATQSADEDGRAWMDTIEDDSPQAAERVAQHRDTEQLREWLVGALSALSARERYIVTERKLREPGRTLESLGEELGLSKERIRHACCLAPCTAASLFSPSSSVLRRWQDR*