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bjp_ig2157_scaffold_11340_3

Organism: BJP_Ig2157_Hor_140_2014_Rhodobacterales_69_94

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 11 / 38 MC: 1
Location: comp(2812..4554)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 580.0
  • Bit_score: 1044
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 579.0
  • Bit_score: 1038
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=RPOB_RHOS5 similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 579.0
  • Bit_score: 1038
  • Evalue 0.0

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Taxonomy

Defluviimonas sp. 20V17 → Defluviimonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1743
GGCGAGGTGATCGCCGACGGCCCGGCCACCGACATGGGCGAGCTGGCGCTGGGCAAGAACGTGCTCGTCGCCTTCATGCCCTGGAACGGCTACAACTTCGAGGACTCGATCCTGATCTCGGAGCGCATCCTGCAGGATGACGTTTTCACCTCGATCCACATCGAGGAATACGAGGTTGCGGCGCGCGACACCAAGCTGGGGCCGGAAGAGATCACCCGCGACATCCCGAACGTCGGCGAGGAAGCGCTGCGCAACCTCGACGAGGCGGGCATCGTCTATATCGGCGCCGAAGTGCAGGCGGGCGACATCCTGGTCGGCAAGATCACCCCCAAGGGCGAGAGCCCGATGACGCCGGAGGAGAAACTCCTGCGCGCCATCTTCGGCGAGAAGGCCTCGGACGTGCGCGACACGTCGCTGCGGCTGCCGCCGGGTGATTTCGGCACGGTGGTGGATGTGCGCGTCTTCAACCGCCACGGCGTCGACAAGGACGAGCGCGCCTTGCAGATCGAGCGCGAGGAAGTGGAACGGCTGGCGCGCGACCGCGACGACGAGTTGGCGATCCTCGAGCGCAACATCTACGCGCGGCTGAAGTCGCTGATCATCGGAAAGGCTGCAGTCAAGGGGCCGAAAGGCGTTAAGGCGGGTTCCACGATCACCGAGGAACTGCTCGATGCGCTCTCGCGCGGGCAGTGGTGGCAGCTTGCGCTGGGCGAGGAAGCCGAGGCGCAGGCGGTCGAGGCGCTGCACGCCCAGTTCGAGGCGCAGAAGAAGGCCCTGGTCGCGCGTTTCGAGGACAAGGTGGAAAAGGTGCGCCGCGGCGACGACCTGCCGCCCGGCGTGATGAAGATGGTCAAGGTTTTCGTCGCGGTGAAGCGCAAGCTGCAGGCGGGCGACAAGGTGGCGGGCCGGCACGGCAACAAGGGCGTGATCTCCAAGGTCATCCCGTGCGAGGACATGCCCTTCCTTGCCGACGGCACGCCGGTCGATGTCGTGCTGAACCCGCTGGGCGTGCCGAGCCGCATGAACGTGGGCCAGATCCTCGAGACCCATATGGGCTGGGCGGCGCGCGGTCTCGGCGTGAAGATCGACGAGGCGTTGCAGCAGTATCGCCGCTCGGGCGATCTGACCCCGGTGCAGGAGGCAATGCGGCTCGCCTATGGAGACGAGGCATACGAGGACGCACTGGCCGGGCGCGACGAGGCGAGCTTCGTCGAGGCGGCCGAGAGCGTCACCAAGGGTGTGCCGATCGCCACACCGGTCTTCGACGGCGCCAAGGAGGCAGATGTGAACGACGCGCTGATGCGCGCGGGGTTCGATGTCTCGGGGCAGTCGGTCGTCTATGACGGGCGCACAGGCGAGCGCTTTGCCCGCCCGGTGACAGTGGGAATGAAATACGTCCTGAAGCTGCATCACCTGGTGGACGACAAGATCCACGCCCGCTCCACCGGCCCCTATAGCCTGGTCACCCAGCAGCCGCTGGGTGGCAAGGCGCAGTTCGGCGGCCAGCGGCTCGGCGAGATGGAGGTCTGGGCTCTGGAAGCCTACGGCGCCGCCTACACGCTTCAGGAAATGCTCACCGTCAAGTCCGATGACGTGGCGGGCCGCACCAAGGTCTACGAGAGCATCGTCAAGGGCGAGGACAATTTCGAGGCCGGCGTGCCGGAGAGCTTCAACGTGCTCGTGAAGGAAGTCCGCGGCCTCGGGCTGAACATGGAACTCCTGGACGCGGAGGAAGACGAGTGA
PROTEIN sequence
Length: 581
GEVIADGPATDMGELALGKNVLVAFMPWNGYNFEDSILISERILQDDVFTSIHIEEYEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAEVQAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGDFGTVVDVRVFNRHGVDKDERALQIEREEVERLARDRDDELAILERNIYARLKSLIIGKAAVKGPKGVKAGSTITEELLDALSRGQWWQLALGEEAEAQAVEALHAQFEAQKKALVARFEDKVEKVRRGDDLPPGVMKMVKVFVAVKRKLQAGDKVAGRHGNKGVISKVIPCEDMPFLADGTPVDVVLNPLGVPSRMNVGQILETHMGWAARGLGVKIDEALQQYRRSGDLTPVQEAMRLAYGDEAYEDALAGRDEASFVEAAESVTKGVPIATPVFDGAKEADVNDALMRAGFDVSGQSVVYDGRTGERFARPVTVGMKYVLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDAEEDE*