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rifcsphigho2_02_scaffold_1097_11

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_44_15

near complete RP 37 / 55 MC: 5 BSCG 18 / 51 ASCG 35 / 38 MC: 1
Location: comp(5865..6641)

Top 3 Functional Annotations

Value Algorithm Source
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 id=5045737 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 258.0
  • Bit_score: 295
  • Evalue 3.80e-77
3'-5' exoribonuclease {ECO:0000313|EMBL:KKU44649.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 259.0
  • Bit_score: 322
  • Evalue 4.10e-85
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 258.0
  • Bit_score: 246
  • Evalue 7.40e-63

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Taxonomy

GWA2_OP11_46_7 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 777
ATGAATTCAGAATTAAGAAACCACATAATCAGGCTTCTTGAGTCGGGCACAAGGCTTGACGGAAGAAAGCTTACAGATTACAGGCAGCCTATAAAGATAGAATACGGCGTCTCGAACACTGCAGAAGGCTCGGCTAAAGTGCAGATTGGCGATACTGAAGTGATTGCCGGCGTGAAGGTTGAAATCTCAACGCCTTTTCCGGACACTCCCGAGGAAGGCGGCCTTATGGTCAATACAGAGCTTCTTCCTCTGTCCAGCCCTGACTTTGAGTCAGGCCCTCCGGGCATAGAGGCCATAGAGCTTGCAAGGGTTGTTGACAGGGCTATAAGGGAAAGCAAGGCGGTTGACTTCAAAGGATTGTGCATCGAAAAGGGCGAGAAGGCATGGTTCATTATGATTGATGTGATATCGCTGAACAGTTCCGGCAATCTTCTGGATGCCGCTTCGCTTGCTGCAATCGCAGCAGTAAAGGACATGCGCTTCCCGGCACTGAATGATGAAGGCAAGATTGAGTACAAGGAAAAGACCGATAAGAAGCTTGGGATGAAAGCGTGGCCCTTATCTGTAACAGTGTCCAAGATTGGCAGCAGCTTCATTGTTGACCCTGACCTTGACGAGGAGAAAGTCATTGACGCGAGGCTGACTGTCGGAAGCCTGGATGACGGCACCTTATGCTCAATGCAGAAAGGCGGCAATTCCCCTCTGGCAGAGCAGGACATACTCCAGATGATTGACATTGCAGTGGAGAAGGCGAAGGAACTGAGGAAGATGCTTTAG
PROTEIN sequence
Length: 259
MNSELRNHIIRLLESGTRLDGRKLTDYRQPIKIEYGVSNTAEGSAKVQIGDTEVIAGVKVEISTPFPDTPEEGGLMVNTELLPLSSPDFESGPPGIEAIELARVVDRAIRESKAVDFKGLCIEKGEKAWFIMIDVISLNSSGNLLDAASLAAIAAVKDMRFPALNDEGKIEYKEKTDKKLGMKAWPLSVTVSKIGSSFIVDPDLDEEKVIDARLTVGSLDDGTLCSMQKGGNSPLAEQDILQMIDIAVEKAKELRKML*