ggKbase home page

bjp_ig2157_scaffold_111_6

Organism: BJP_Ig2157_Hor_140_2014_GWC2_Spirochaete_52_11

near complete RP 49 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(2911..4506)

Top 3 Functional Annotations

Value Algorithm Source
DbpA RNA-binding domain protein id=2825712 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 532.0
  • Bit_score: 1022
  • Evalue 2.10e-295
  • rbh
DbpA RNA-binding domain-containing protein Tax=GWC2_Spirochaetes_52_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 531.0
  • Bit_score: 1022
  • Evalue 2.90e-295
DbpA RNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 200.0
  • Bit_score: 227
  • Evalue 7.30e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Spirochaetes_52_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 1596
ATGACTGATCTGGCGATCCCCTCCCTGCTTCTAGGCAAACTGCAAGAACTGGAATCCACCGGCACACACTCACCGCTTTTTATAGAAGTGGGTGATGGAGTTGTGCCCATCGCGTTGAACCGGTCTATACAGTTGGCGAAACAGCATAAGATCCCGGGACGATCACCGAATGCTCCACTGGCTAGCGAACCCAACATTTTGTTGCTCCTTTCGCAAGAACAGCTCGAATATTGGTTGGAACGTCCTGAAAGTTCATTCTGCAACACGTTTACTTGTCTATCCGAAACACAATCCCCACGGGCCGACCTGTCGGCTCTCAGCGACAAGTCGAGGATACTGGCGACGACCCCCCAACGGGCGATAGACCATATCCGAAGAGACAACATCTTTCTTTCGTCGACAACGTCGGTTGTTCTTGCCTACAGTTTCATCCAAGAAGCTGAGGAGACTGAAGAACAGTTGAAAGTGAGGGAGTTCGCGTTTCTGGATGATTGTCGGTTTGTATTCACCAAATTGAATTCCACTGTCCAGATCGAATTGTTTGCCGACACCCTTTCCCATCTCGCCAGAACCCCACAGGAGCTGGTGGAACATCCCGTTATGGTGCTGCAGTCCGAATGGGAGCTGCCTGCGCATCTATTGGAATGTTACACCATCCCCAGACTTGCGACCGCCCGTATCCTGGATACATTGTATGCCCTCCAGGGGCAGCGATACCTGGTAATCCATAGGACCGAGATCCTGTGGAAAGCCCTGGACAAGCGGTTGCGCGAATCCAAACCCCCTATTCCAGCAATTGGAATTGGTTTCGATCGATTGACCTCATTGAAGGAATCCGACGCGATACAAGTCGGGACCCTCGTCGCAATCGGTCTGAACAGCGGGGAATTGCTCTCGGTGATACGACATATGTGTGAATGGAAGAATGTCCTTCCACGCTTCGTTTGTATTGCCACAGCCGAAGAGGCAAAAGAAATCACCACATCCAAGGAGACCCTGCTCATGAACAATGAAACGAAACCTAGCCCAGAAAACAACGAAGTACTCGCCGGAAAGATCCAGATGCTTGTCGCCAAACTCAATATCGATTCCAATCCCGAGGAACTTGAGACATTGAAAAAGATCATAAAGAAAAACGTACCATTCTTCCGTCGCGGTTATTTCACCGCATACATCCTGCGGGAATTGCTCGGAGGTCCTGAAAAGCGGACCGTAGGCAAGCCGAGGGCCGCAGCTGCCCAAGCAACTGAAAAGCCGGCACCAGCGGCACGAAAGGCTACGGCAAAGGCTCCTCGGGAACCTCGGGAGTCACGCGAACCCCGCGAGAAGGAACAGAACGACGCTCCCATCCCCGAAGGTGCGAGAACGTTGTATCTCAATATCGGCAAGATGCGACGGCTATACGCGAAGGAACTCTCGCAGATCCTGCAGGACCAGCTGTCCATTTCCCGCGAGGACATTTTCTCCATTCGCGTCCACGACAAGTATTCCTTCATAACCTTGTCCCAGGAACATGCGGAAAAGGCTATTGAAAAGATGAATGGCATGGATATCCGCGGCAGGATCGCCGCAATCAGCTACTCGAACAAGGAATAG
PROTEIN sequence
Length: 532
MTDLAIPSLLLGKLQELESTGTHSPLFIEVGDGVVPIALNRSIQLAKQHKIPGRSPNAPLASEPNILLLLSQEQLEYWLERPESSFCNTFTCLSETQSPRADLSALSDKSRILATTPQRAIDHIRRDNIFLSSTTSVVLAYSFIQEAEETEEQLKVREFAFLDDCRFVFTKLNSTVQIELFADTLSHLARTPQELVEHPVMVLQSEWELPAHLLECYTIPRLATARILDTLYALQGQRYLVIHRTEILWKALDKRLRESKPPIPAIGIGFDRLTSLKESDAIQVGTLVAIGLNSGELLSVIRHMCEWKNVLPRFVCIATAEEAKEITTSKETLLMNNETKPSPENNEVLAGKIQMLVAKLNIDSNPEELETLKKIIKKNVPFFRRGYFTAYILRELLGGPEKRTVGKPRAAAAQATEKPAPAARKATAKAPREPRESREPREKEQNDAPIPEGARTLYLNIGKMRRLYAKELSQILQDQLSISREDIFSIRVHDKYSFITLSQEHAEKAIEKMNGMDIRGRIAAISYSNKE*