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bjp_ig2157_scaffold_696_10

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: comp(8293..8943)

Top 3 Functional Annotations

Value Algorithm Source
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K11719 lipopolysaccharide export system protein LptC id=5083677 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 217.0
  • Bit_score: 421
  • Evalue 5.00e-115
  • rbh
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K11719 lipopolysaccharide export system protein LptC Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 216.0
  • Bit_score: 421
  • Evalue 9.20e-115
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 216.0
  • Bit_score: 195
  • Evalue 1.60e-47

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
GTGAACGCGCCCGCACCACCCACCGATCCCCAGGCGAAGAAGCGCCGCAGGGGCCTGAGCCGGGTCTGGGACCAGCTCTCCCTGTATTTGCCGGTGCTGTTGATGATGCCGCTGGCGCTGGCGTCCTACCTCCTGCTGCAGGCCACGCCCCAGCCCATGGAGCCCGAGCCCGAGCGACTGCTCACCAACGAACCCGACTTCTTCATGCGGCGGTTTTCCGTCAAGGTGTTTGCGCCCAACGGGACATTGCAAACCGAGGTCTACGGAGCCGAGGCCCGCCACCACCCTGACACGGACCGCACGGTCATCGACACCGCACGCATCCGCACCTACAGCGCGCAGCGCCAGCTCTCCACGGCCACGGCGCGCGAGATCATCAGCAACGGCGAGGGCACGGTTTACGAGCTCAGGGGCGATGCGGTGGTGGTGCGCCAAGCCGCACGCAACGCCGCTGGCGAGCGCTTGCCGCGCATGGAGTTCCACGGCGAATTTCTGCGGGTTAGCACCGACCCCGAACACATCGAATCGGATCTTCCGGTGCTGTTGATCCGTGACAAGGACCAGATGACGGCGGACACGCTCGACTACCGCGGTGATTCGCGCGTGGTCGAACTCAATGGCCGGGTTCGCGCCCAGCTCGCGCCGCGCTGA
PROTEIN sequence
Length: 217
VNAPAPPTDPQAKKRRRGLSRVWDQLSLYLPVLLMMPLALASYLLLQATPQPMEPEPERLLTNEPDFFMRRFSVKVFAPNGTLQTEVYGAEARHHPDTDRTVIDTARIRTYSAQRQLSTATAREIISNGEGTVYELRGDAVVVRQAARNAAGERLPRMEFHGEFLRVSTDPEHIESDLPVLLIRDKDQMTADTLDYRGDSRVVELNGRVRAQLAPR*