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bjp_ig2157_scaffold_138_23

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: comp(22342..23106)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZ14_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 247.0
  • Bit_score: 273
  • Evalue 2.00e-70
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 247.0
  • Bit_score: 273
  • Evalue 5.60e-71
Regulatory protein TetR {ECO:0000313|EMBL:ADU34343.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 247.0
  • Bit_score: 273
  • Evalue 2.80e-70

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGTTCAATCATTTTGTACATCTGTTCAATACCGGCATGCCCAGCCCCCGCCCTCCCCGCTCCGGCGCCCGCCGCTCAGAAGCCGCTGCTGCCCGGCCCGACCGCCAGATGGCCATCCTGCTGGCCGCTGAAAAGCTGTTCGCGCAGCGCGGTTACCACGGCGTGACCATCCGGGAGATCGCCGAGGAGGCCGGAGTTCCATTGGCGCTGGTGGGCTACTACTACGGCCCCAAGCACGAGTTGTTTCACGCCATCTTCGTGCACTGGCAGGCCACTGCAGAACAGCGGCTGACGCTGCTGGACGAAGTCATCCAGTCGCCCGGAAAAGGAGATCGCCTGCGCCAGGTGGTGGAAGCTTTCGTGCGACCGGTGCTGGCCCAGCGCGCCAGTGCAGAGGGCGAGTACTACGCGCAACTGGTGGCGCGTGAACTGGCGCGCCAGACACCCGAGACCCAGCGCGTGCTGGGCGAGTTCTTCGACCCACTGGCGCACCGATTCATCGACGCCCTGCATGCCACACGCCCGGGTTGCGATCGCACCCTGGTGGCCTGGGCCTACCAGTTCGCCCTGGGTGCGCTGCTGCACCACATCAGCGATCACCGCATGCCCACGCTTTCGCGCGGCCAAGCCCAGGCAAACGACCCGGCCGCCGGCGATCTGCTGGTCGACTTCATCACAGCAGGCGTCGGTGCGCTGCTGCCCGTTTCCCGGACCCCGCGCCCACGAGCGCCTGCTTCTTCATCCACCAACAGGAGACAACCATGA
PROTEIN sequence
Length: 255
MFNHFVHLFNTGMPSPRPPRSGARRSEAAAARPDRQMAILLAAEKLFAQRGYHGVTIREIAEEAGVPLALVGYYYGPKHELFHAIFVHWQATAEQRLTLLDEVIQSPGKGDRLRQVVEAFVRPVLAQRASAEGEYYAQLVARELARQTPETQRVLGEFFDPLAHRFIDALHATRPGCDRTLVAWAYQFALGALLHHISDHRMPTLSRGQAQANDPAAGDLLVDFITAGVGALLPVSRTPRPRAPASSSTNRRQP*