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bjp_ig2157_scaffold_435_6

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: 5759..6778

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=5082664 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 340.0
  • Bit_score: 674
  • Evalue 5.10e-191
  • rbh
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 339.0
  • Bit_score: 674
  • Evalue 7.20e-191
rluD; uracil hydrolyase similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 335.0
  • Bit_score: 378
  • Evalue 1.60e-102

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGGGGGGTGCGTTGACACCGGGGATGACCCCAGAGGCTTCAGAGTCAGCGACCGGCGGCGATGACGCCCTGCTGGAGGCCGAGACCCGTTGTTGCGAAATCCCGGCCGAGATGCATGGCTGGCGGGTCGATCGCGCGCTGGCCCGCCTGATCCCCGAATTCTCGCGTTCCTATCTGCAGCAGCTCATGGCCGATGGTGCCGTGCAGCTGCTGGGGGCTGCTGTCCACAAGCCCTCGACCCGCATCCAGGTGGGGCATCTGCTGCAGGTGGAATTGCGCCCAACCCAGCAGGCCATGGCCTTTGTGGCCCAGCCGATGGCGCTGGACGTGGTTTTCGAAGACGCGCACCTGCTCGTGGTCAACAAGCCCGCCGGGCTCGTGGTGCACCCGGCAGCCGGGAACTGGAGCGGCACGCTGCTCAATGGTCTGCTGGCCCACCACGCTGCGGCGGCCCAGTTGCCGCGCGCGGGCATCGTGCACCGGCTCGACAAGGACACCTCGGGCCTGATGCTGGTGGGCAAGAGCCGGCAGGCCGTCGATGCCCTGGTGCGGGCCATCGCGGCGCGCGAGGTGCACCGGGGGTATGTCGCGCTGGCGCAGGGCCGCTGGAAAGGCGCGGCCGAGCAATTGGTGGACCAGCCCGTGGGTCGCGACACCCACAACCGCTTGCGCATGGCGGTGCTGCGGCCCGATGCCACCGGTGGAAAACCCGCCCAGACCACCATCCGGCTGCTCGACGGCAACGAGCAGGCCTGTCTGGTGGTCTGCAAGCTGCACACCGGCCGCACGCACCAGATCCGGGTGCACATGGCCTGGCTCGGGCATCCGCTGGTGGGCGATGCGCTGTACGGCGGCAAGCCTCTGTACGACATGCCGCGCCAGGCCTTGCACGCCACACGCCTGCGTCTCCTGCACCCGATCTCGGGCGAGCCGCTCGCATTCCAGTCCGCGCCACCGGCCGATTTTCAGGAAGCCCTGTCAAAGTCCGGGCTCCATTACAATGAAGCGCAGTTGGGGTGA
PROTEIN sequence
Length: 340
MGGALTPGMTPEASESATGGDDALLEAETRCCEIPAEMHGWRVDRALARLIPEFSRSYLQQLMADGAVQLLGAAVHKPSTRIQVGHLLQVELRPTQQAMAFVAQPMALDVVFEDAHLLVVNKPAGLVVHPAAGNWSGTLLNGLLAHHAAAAQLPRAGIVHRLDKDTSGLMLVGKSRQAVDALVRAIAAREVHRGYVALAQGRWKGAAEQLVDQPVGRDTHNRLRMAVLRPDATGGKPAQTTIRLLDGNEQACLVVCKLHTGRTHQIRVHMAWLGHPLVGDALYGGKPLYDMPRQALHATRLRLLHPISGEPLAFQSAPPADFQEALSKSGLHYNEAQLG*