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bjp_ig2157_scaffold_918_17

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: 12481..12837

Top 3 Functional Annotations

Value Algorithm Source
Fis family two component sigma-54 specific transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 119.0
  • Bit_score: 227
  • Evalue 8.20e-57
two component, sigma54 specific, Fis family transcriptional regulator id=5083324 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 107.0
  • Bit_score: 214
  • Evalue 5.10e-53
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 114.0
  • Bit_score: 201
  • Evalue 1.60e-49

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
GTGACACCTCCACTCCTTCCCGAAGCCCTGCCCACCGTGCTCGTGGTGGACGACGAGGTGCGCTCGCAGGACGCGATGCGGCGCACGCTGGACGAGGACTTCACGGTCTTCACCGCCAGCAGCGCGGAGGAGGCGCGCGGCCTGCTGGAGCGGCAACCCGTGAGCGTGATCCTGTGCGACCAGCGCATGCCCGGCGTGACCGGCGTGACCTTCCTGAAGGAGGTGCGCGAGCGGTGGCCGGAGACCGTGCGCATCGTCATCTCGGGCTACACCGATTCCGAAGACATCATCGCCGGCATCAACGAGGCCGGCATCTACCAGTACATCCTCAAGCCCTGGGCGCCCGACCACCTGCTC
PROTEIN sequence
Length: 119
VTPPLLPEALPTVLVVDDEVRSQDAMRRTLDEDFTVFTASSAEEARGLLERQPVSVILCDQRMPGVTGVTFLKEVRERWPETVRIVISGYTDSEDIIAGINEAGIYQYILKPWAPDHLL