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bjp_ig2157_scaffold_340_15

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: 15577..15747

Top 3 Functional Annotations

Value Algorithm Source
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 id=5082364 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 57.0
  • Bit_score: 117
  • Evalue 4.10e-24
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 56.0
  • Bit_score: 117
  • Evalue 5.60e-24
rpmG; 50S ribosomal protein L33 similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 56.0
  • Bit_score: 112
  • Evalue 3.60e-23

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Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGGCAACCAAAGGCGGACGCGAAAAGATCAAGCTGGAATCCACTGCGGGTACCGGCCACTTCTACACCACGACCAAAAACAAGAAGACCACGCCCGAGAAGATGCTGATCAAGAAATTTGATCCGAAAGCTCGCAAGCACGTGGACTACAAGGAAATCAAGCTGAAGTAA
PROTEIN sequence
Length: 57
MATKGGREKIKLESTAGTGHFYTTTKNKKTTPEKMLIKKFDPKARKHVDYKEIKLK*