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bjp_ig2157_scaffold_340_18

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: 18629..20248

Top 3 Functional Annotations

Value Algorithm Source
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3 Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 539.0
  • Bit_score: 1062
  • Evalue 0.0
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3 id=5082367 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 540.0
  • Bit_score: 1062
  • Evalue 0.0
  • rbh
peptide chain release factor RF-3 similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 539.0
  • Bit_score: 956
  • Evalue 4.00e-276

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
ATGTCCGAAATTTCGAATCAGGTGAAGCGTCGCCGCACCTTCGCCATCATCTCCCACCCTGACGCGGGTAAAACGACCCTGACCGAGAAGCTGCTGCTGTTCTCGGGCGCCATCAACATCGCCGGTTCGGTGAAGGCGCGCAAGGCCGCGCGCCACGCCACGTCCGACTGGATGGAAATCGAAAAGCAGCGCGGCATTTCCGTGGCGTCGTCCGTGATGCAGATGGAATACCGCGACTGCGTCATCAACCTGCTCGACACCCCGGGTCACCAGGACTTTTCTGAAGACACCTACCGAGTGCTGACCGCCGTGGACGCGGCCCTCATGGTGATCGACGCCGGCAACGGTGTGGAACCGCAGACGCGGCGCCTGCTGCAGGTCTGCCGCGCGCGCAACACGCCCATCCTCACCTTCGTCAACAAGATGGACCGCGAGGTGCAGGCCCCACTGGACCTCATGGACGAGATCGAGCGTGAGCTGGGCATGACCGTGGTGCCGTTCACCTGGCCGGTGGGCATGGGCAAGACGTTCCGCGGCGTGTACGACCGGCGCACCGACCAGATGCGCGTGTTCGCTGCGGGCGAAGACCGGCGTGGCGGCGATGAAGACGTATTGGCCGGCCTGGACAACCCCGAGAGCCTGAAGCGTTTTGGCGCCGAGTTCGAACAGGCCAAAGGCGAGCTGGAACTGGTCGAAGGCGCTTCGCCCGCGTTCGACGAAGCACAGTTTCTGGCGGGCAAACAGACGCCCATGCTGTTCGGCTCGGCGGTCAATAACTTCGGCGTGCGCGAGGTGCTGGACGCGCTTGTGGACCTGGCACCGCCTCCGGGCGACCGCCCCGCCATCCAGCGTGTGGTGCACCCCGAAGAGCCGAAGTTCACCGGCGTGGTGTTCAAGATCCAGGCCAACATGGACCCGGCGCACCGCGACCGCATCGCCTTCGTGCGCGTGGCCAGCGGCCACTTTGAACGCGGCATGAAGCTCAGGGTGGTGCGCAGCGGCAAGGACCTGCGGCCCAACACCGTGGTGAGCTTTTTGTCGCAGCGGCGCGAGCTGCTGGACGAGGCGTTTGCCGGCGACATCATCGGCATCCCGAACCACGGTGTGCTGCAGCTCGGCGACACCTTGACGGAGGGTGAAAGCCTGCAGTTCACCGGTCTGCCCTTCTTCGCGCCGGAAATCATCCGCAGCGTGGAAGTGGCCGATCCGCTGCGCAGCAAGCAGCTGCGCGCCGGCCTGACCCAACTGGGTGAAGAAGGCGCAATCCAGGTATTCCGCCCGGTGGCGGGCAGCGTGCTGCTGCTCGGCGCCGTGGGCCAGTTGCAGTTCGAAGTGGTGGCGCACCGGCTGGAACACGAATACGGTGTCAAGGCCCGCATCATGGGCAGCCCCTACCAGGTGGCTCGCTGGGTCACCTGTGCACCCGAAGACGGTGGCGAGATCGAACTCAAGAAGTTCATTGATGCCAACAGCCACCGGGTGGCGCTGGACGCCGTGGACGCGCCCACGTTGCTGGTGGACCACCAAGCCACGCTGCGCGCGGTCGAGGCTAACTGGCCGAAGATCAAGTTCCACGCCATGCGGGAACACGCGGGCCTGGTATTCGCAAAAGGCGTCTGA
PROTEIN sequence
Length: 540
MSEISNQVKRRRTFAIISHPDAGKTTLTEKLLLFSGAINIAGSVKARKAARHATSDWMEIEKQRGISVASSVMQMEYRDCVINLLDTPGHQDFSEDTYRVLTAVDAALMVIDAGNGVEPQTRRLLQVCRARNTPILTFVNKMDREVQAPLDLMDEIERELGMTVVPFTWPVGMGKTFRGVYDRRTDQMRVFAAGEDRRGGDEDVLAGLDNPESLKRFGAEFEQAKGELELVEGASPAFDEAQFLAGKQTPMLFGSAVNNFGVREVLDALVDLAPPPGDRPAIQRVVHPEEPKFTGVVFKIQANMDPAHRDRIAFVRVASGHFERGMKLRVVRSGKDLRPNTVVSFLSQRRELLDEAFAGDIIGIPNHGVLQLGDTLTEGESLQFTGLPFFAPEIIRSVEVADPLRSKQLRAGLTQLGEEGAIQVFRPVAGSVLLLGAVGQLQFEVVAHRLEHEYGVKARIMGSPYQVARWVTCAPEDGGEIELKKFIDANSHRVALDAVDAPTLLVDHQATLRAVEANWPKIKFHAMREHAGLVFAKGV*