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bjp_ig2157_scaffold_352_6

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: 5023..5388

Top 3 Functional Annotations

Value Algorithm Source
response regulator receiver protein; K02658 twitching motility two-component system response regulator PilH id=5080225 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 122.0
  • Bit_score: 239
  • Evalue 2.00e-60
Transcriptional regulatory protein YycF {ECO:0000313|EMBL:EWS65720.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="H similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 239
  • Evalue 2.80e-60
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 121.0
  • Bit_score: 210
  • Evalue 2.80e-52

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Taxonomy

Hydrogenophaga sp. T4 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGTCCATTAAAAAAATTCTCGTTGTGGATGATTCCAAGACCGAACTGATGGTCCTGTCGGACCTGTTGGGGAAAAATGGCTACAACGTGCGCACCGCCGAGAACGCTGAAGAAGCCTTTCGTCGGTTGAGCGAGGAAAAGCCGGAACTCATTTTGATGGACGTGGTGATGCCCGGTCAGAATGGGTTTCAGTTGACGCGGGCGATCGCACGCGATCCCCAGTACTCCAGCATTCCCATCATCATGTGCACCAGCAAGAATCAGGAAACCGATCGGGTCTGGGGCATGCGTCAGGGCGCACGCGATTACGTGACCAAGCCGGTGAATGCCGAGGAACTGCTGTCCAAGATCCGGGCCCTCGGCTGA
PROTEIN sequence
Length: 122
MSIKKILVVDDSKTELMVLSDLLGKNGYNVRTAENAEEAFRRLSEEKPELILMDVVMPGQNGFQLTRAIARDPQYSSIPIIMCTSKNQETDRVWGMRQGARDYVTKPVNAEELLSKIRALG*