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bjp_ig2157_scaffold_1255_6

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: 2751..3053

Top 3 Functional Annotations

Value Algorithm Source
RNP-1-like RNA-binding protein id=5083657 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 202
  • Evalue 2.20e-49
RNP-1 like RNA-binding protein Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 100.0
  • Bit_score: 202
  • Evalue 3.10e-49
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 100.0
  • Bit_score: 139
  • Evalue 3.80e-31

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGAGCACCAAACTTTACGTGGGCAACCTGCCTTATTCCATCGACGACGCCATCCTGCGCAACAACTTCACGGAGTTTGGCGGCGTGACGTCGGCCAAGGTCATGATGGACCGCGACACGGGTCGCTCCAAGGGCTTCGGCTTTGTGGAAATGTCCACCAGCGAACAGGCCGAGGCCGCGATCCAGAGCCTCAACGGCATGTCGGTTGACGGCCGCTCGATCGTGGTGAACATCTCGCGCCCGAAAGAGCCGAGCACCGGCGGCTACGGCGGTGGTGACCGCGGCTCGCGCGGCGGCTACTGA
PROTEIN sequence
Length: 101
MSTKLYVGNLPYSIDDAILRNNFTEFGGVTSAKVMMDRDTGRSKGFGFVEMSTSEQAEAAIQSLNGMSVDGRSIVVNISRPKEPSTGGYGGGDRGSRGGY*