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bjp_ig2157_scaffold_1272_3

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: 1762..3816

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 factor interaction domain-containing protein id=5080040 bin=GWF1_Burkholderiales_GWF1_66_17 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 685.0
  • Bit_score: 1367
  • Evalue 0.0
  • rbh
GAF modulated sigma54 specific transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 684.0
  • Bit_score: 1367
  • Evalue 0.0
GAF modulated sigma54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 679.0
  • Bit_score: 937
  • Evalue 2.40e-270

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2055
ATGAGTGCAGGCATCCACACGCGCCCCGACGAAGGACGCGTCGGGGCTGGGCCAGCTGGCGCCTCCCCGAACCCCGACCTGATCGGCCAGTCCCACCGGCGTTCGCAGGCCTATGGCATCACGGCGCAGGCCGAGCCCGACTTCTCCAGCCCCTCGCGTGGCGTGTTGAACGACGCGCTGGACGAAAACCGCTTTCTCTTCCAGCACGCCGCCCCCGTGATGGAGACGCTGTACGACCAGATCGTCAACACCCACAGCATGGTGCTGCTGACCTCGGCACGCGGCATGGTGCTGCACTCGCTGGGCGACACCGATTTTCTGGAAAAAGCTTCGCGCGTGGCGCTCACGCCCGGCATGGACTGGTCCGAGCAGACCAAGGGCACCAACGCCATCGGCACCGCACTGACCGAAGAAGAAGCGCTCACGGTGCACGGCAACCAGCACTACCTGAACGCCAACAAGTTCCTCACCTGCTCCGCCGCGCCCATCTTCGACCCCTACGGCCAGGTCATCGGCGCGCTCGACGTCACGGGTGACCACCGCAGCTTCCACCAGCACACGCTGGCGCTGGTGCGCATGTCGGCGCAGATGATCGAGAACCACATGTTCGCCGACATCTTCCCGAAGGCGATCCGCATCCACTTCCACACCCGCTCCGAATTCCTGGGCACGCTGGTCGAAGGCATCGCGGTGTTTTCGCCCGAGGGGCGTTTCATCTCGGCCAACCGCAGCGGGCAGTTCCAGATCGGCCTGCCCTTCGCCGCGCTCAAGGCCCACACCTTTTCTTCGCTGTTCGGCATCCCGATCTCGGCGCTGTTCGAGCTGTTCAGCGGCGCCATGCCCAACCCCAAGCAGCTGGTGCTGCACAACGGTGTTTCGGTGTGGTGCCGCGTCAAGGTCAAGACGGCCCATCCCTGGTCGGCGTCCCGGCCAGATAGCCCCCAGGGACCGCAGGCCTTCACCGCGGAAACGGGTCAGGGCGCGGCAGCGCACGCGCCGGCCAAGCCACCCGTCAAACGCCCGCAGCTCTCATCGCTGCAATACCTAGACACCGGTGACCCCCAGGTGTCGTCGGTCATCCACAAGTTGCGCATGGTGTCGGGCAAGGACATCCCGGTCATGATCCTGGGCGAAACCGGCACCGGCAAGGACCTGCTGGCGCAGGCCATCCATGGTGACTCGGACCGTTCCGGCCAGCCCTTCGTGTCGGTCAACTGCGCGTCGATTCCCGAGACCCTGATCGAGTCCGAGCTGTTCGGCTACGAAGAAGGCGCCTTCACCGGTGCGCGCAAGAAGGGCGCCATCGGCAAGATCCTGCAGGCCCATGGCGGCACGCTGTTCCTTGACGAAATCGGTGACATGCCCAAACACCTGCAGGCGCGGCTGTTGCGCGTGCTGCAGGAGCGCCGGGTCAGCCCGCTGGGCGCGGGCAAGGAAGTGGACGTGGACGTGGCCGTGGTCTGCGCCACGCACAAGAACATCAAGGACATGATCGCGCGCGGCGACTTCCGCGAAGACCTCTACTACCGGCTCAACGGCCTGGTGGTGCGCCTGCCGGCGCTGCGTGAACGCTCCGACTTCGAACTCGTCGTGCGAAAGATCCTCAAGGCCCTGTGCGAGAACGGCGAGCAGATCGGCATCTCGCCCGAGGTCATGAACATCTTCAAGCGCTACCACTGGCCGGGCAACTTCCGCCAGCTGCACAACCTGATGCGCACCGCCGTGGTCATGGTGGGCTGCCAGGGCGTGATCGAACTGAGCCACCTGCCCGACGATTTCCTGGAAGAGCTGGAACACGGCCTGCCCAACCCGATCCCGTCGCGCCTGATGGGATCGATCGGCCCGGCCCAGCCGCTGCCCGATGCGCCCAGCACCGCCCCGATGCCCGAACCCACGGTGCCTGAAGGCACGCGCCTGGAAGACGTGGCCCTGAGCGCCATGGCGCAGATGCTGCGGCTGCACAAAGGCAACGTGTCGGCCGCGGCCAAGGCGCTGGGCGTCTCGCGCAACACGATCTACCGGAAAAAAGATCTGCTACCGCCGGGGACTTTGTGA
PROTEIN sequence
Length: 685
MSAGIHTRPDEGRVGAGPAGASPNPDLIGQSHRRSQAYGITAQAEPDFSSPSRGVLNDALDENRFLFQHAAPVMETLYDQIVNTHSMVLLTSARGMVLHSLGDTDFLEKASRVALTPGMDWSEQTKGTNAIGTALTEEEALTVHGNQHYLNANKFLTCSAAPIFDPYGQVIGALDVTGDHRSFHQHTLALVRMSAQMIENHMFADIFPKAIRIHFHTRSEFLGTLVEGIAVFSPEGRFISANRSGQFQIGLPFAALKAHTFSSLFGIPISALFELFSGAMPNPKQLVLHNGVSVWCRVKVKTAHPWSASRPDSPQGPQAFTAETGQGAAAHAPAKPPVKRPQLSSLQYLDTGDPQVSSVIHKLRMVSGKDIPVMILGETGTGKDLLAQAIHGDSDRSGQPFVSVNCASIPETLIESELFGYEEGAFTGARKKGAIGKILQAHGGTLFLDEIGDMPKHLQARLLRVLQERRVSPLGAGKEVDVDVAVVCATHKNIKDMIARGDFREDLYYRLNGLVVRLPALRERSDFELVVRKILKALCENGEQIGISPEVMNIFKRYHWPGNFRQLHNLMRTAVVMVGCQGVIELSHLPDDFLEELEHGLPNPIPSRLMGSIGPAQPLPDAPSTAPMPEPTVPEGTRLEDVALSAMAQMLRLHKGNVSAAAKALGVSRNTIYRKKDLLPPGTL*