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bjp_ig2157_scaffold_2126_6

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: 3497..4432

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] id=5083295 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 312.0
  • Bit_score: 633
  • Evalue 1.60e-178
  • rbh
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 311.0
  • Bit_score: 632
  • Evalue 2.90e-178
pseudouridylate synthase, 23S RNA-specific similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 315.0
  • Bit_score: 379
  • Evalue 6.80e-103

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
GTGGCCCGATCCTCCAAGAACCCGCTCATTCCCGCCCGCGACGGTGTGTCGCCCAGCTGCGTCGCACTGCCTGGGGTCAAAGCCGGTGACGCCCGCTGGCCCGGCGTGATCGACTTTCTGGACGAGCGCCTGCCGAAGGTGGGGCGCGCGGCGTGGGCCGAGCGGCTGGCCACGGGCGCGGTGCTGGACGAAGCGGGCCAGGCCGTACCGCCCGAGGCGCCGTACCGGGGCAATACGCGGCTGTATTACTACCGCGAGCTGCCGGACGAAGAGGTGGTGCCATTTGAAGAAACGGTGCTCTACCAGGACGCGCATCTGGTGGTGGCCGACAAACCGCACTTTCTGCCCGTGACGCCGGGCGGGCGCTATGTGCAGCAGACTTTGCTGGTGCGCCTTCAACGCAAGCTCGGCCTGCCACAGCTGGCACCGCTGCACCGCATTGATCGCGAAACCGCCGGGCTGGTGCTGTTGGCCGTGAATCCCGCCGAGCGCGGGACCTACCACGCGCTCTTCAGTGGGCGAACCATGCAAAAGACCTACGAGGCCATCGCGCCGGCCACCGAAGCATGGACCTGGCCGCGCACGAGCAGCAGCCGCATCGTGGAACACCCGGCCGATTTTTTCCGCATGAACGAGGTGGCTGGTGAGCCGAACAGCGAGACACGCATCGATGTGCTGGAGCGGCGCGGCGACTGGGCGCGCTATGCGCTGGAACCTGTCACCGGCAAACGCCATCAACTTCGCGTGCACATGAACGCACTCGGCCTGGCCATCGTGGGCGACCAGCTCTACCCGACCGTGCTGCACGGGCCGGACGAAGCGGAAGATTTTGCGAACCCGCTGCGCCTGCTGGCGCGGGGCATCGCCTTCACGGACCCGGTGACGGGCGAGCCGCGTGCCTTCCAGAGCCAGCGGGTGCTGGACTGGCCCACCTGA
PROTEIN sequence
Length: 312
VARSSKNPLIPARDGVSPSCVALPGVKAGDARWPGVIDFLDERLPKVGRAAWAERLATGAVLDEAGQAVPPEAPYRGNTRLYYYRELPDEEVVPFEETVLYQDAHLVVADKPHFLPVTPGGRYVQQTLLVRLQRKLGLPQLAPLHRIDRETAGLVLLAVNPAERGTYHALFSGRTMQKTYEAIAPATEAWTWPRTSSSRIVEHPADFFRMNEVAGEPNSETRIDVLERRGDWARYALEPVTGKRHQLRVHMNALGLAIVGDQLYPTVLHGPDEAEDFANPLRLLARGIAFTDPVTGEPRAFQSQRVLDWPT*