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bjp_ig2157_scaffold_5121_1

Organism: BJP_Ig2157_Hor_140_2014_Burkholderiales_65_17

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 4
Location: comp(1..624)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=5083525 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 410
  • Evalue 8.50e-112
  • rbh
rpsC; 30S ribosomal protein S3 Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 410
  • Evalue 1.20e-111
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 208.0
  • Bit_score: 398
  • Evalue 1.20e-108

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGGACAGAAAATCAACCCCACCGGGTTCCGCCTCGCCATTTCGCGCAACTGGGCAAGCCGCTGGTACGCAAGCAATCGCGACTTCGCCGGCATGCTGGCCGAAGACATCAAGGTGCGCGAGTACCTCAAGGGCAAGCTGAAGAACGCCGCGGTTTCCCGCGTCGTGATCGAGCGTCCTGCCAAGAACGCCCGCATCACCATTTACTCGGCACGTCCGGGCGTGGTGATCGGCAAGAAGGGTGAAGACATCGAGAAGCTGAAGAAAGAACTGGCGGCCAAGCTGGGCGTGCCGGTTGCGGTCAACATCGAAGAAGTGCGCAAGCCCGAAATCGATGCCAAGCTGATCGCCGACAGCATCACGCAGCAGCTCGAAAAGCGCATCATGTTCCGCCGCGCCATGAAGCGCGCCATGCAGAACGCCATGCGTCTGGGTGCCCTGGGCATCAAGATCATGTCGTCCGGTCGTCTGAACGGTATCGAAATCGCCCGTTGCGAGTGGTACCGCGAAGGCCGCGTGCCGCTCCACACCCTGCGCGCCGACATCGACTACGGCACGTCCGAAGCCAAGACCACCTACGGCATCATCGGTGTCAAGGTCTGGGTCTACAAGGGCGACACCCTG
PROTEIN sequence
Length: 208
MGQKINPTGFRLAISRNWASRWYASNRDFAGMLAEDIKVREYLKGKLKNAAVSRVVIERPAKNARITIYSARPGVVIGKKGEDIEKLKKELAAKLGVPVAVNIEEVRKPEIDAKLIADSITQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRADIDYGTSEAKTTYGIIGVKVWVYKGDTL