ggKbase home page

rifcsphigho2_02_scaffold_11123_1

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_37_9

near complete RP 35 / 55 MC: 3 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 1
Location: comp(170..1510)

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S12H4_L02343 {ECO:0000313|EMBL:GAI83156.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 277.0
  • Bit_score: 226
  • Evalue 8.90e-56
condensin subunit ScpB; K06024 segregation and condensation protein B id=5048379 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 260.0
  • Bit_score: 163
  • Evalue 5.10e-37
Segregation and condensation protein B similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 177.0
  • Bit_score: 117
  • Evalue 9.00e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 1341
ATGGATGAGCAAGTATCAGAACCAAAAGTACAAAATACGAGCCAGCAGAAAACATCCTCTCAATTACCTTTATTATTAAGGATAGAGGCTTTATTGTTTGCAGCTGCTAGGTATGTTACTATAGAAGAGCTTTCTGGCCATACAAACGCTTCTCCTTCTGAGATAAAAGCTGCGATAGAAGAGCTTAAGAAACAATTAGTAAATAGTAATACTTCCCTTAATCTTCTTGACCAGCAGACAGCAGTCAAGCTTAATGTAAAAGATGATTATCTGCCTGTAGTCCATAAAATAATACAGACAATAGAATTTGAAAAGCCTTTGATGCAGACTTTGGCAGTAATCGCTTGGAAATATCCAGCTTTACAGGCTGATATAATAAGGATTCGCCATAATAAAGCATATGATCATCTCATGCGCCTTGAGGAGCTTGGGTTTATCAACAGGACAAGATACGGAAGAACTAAAAAAATAAATTTGACTCAGAAATTCTTTGAATATTTTGATCTTCCTTCAAGGAAACAAGCGCAGCAAGCTTTTAGAGAATCATTGCCTGATGAAATTAAGAATCAGGTCGAGCAGACTGAAAAACAGATCGAAGAGACAGAGAAAGTAATTGAAGAAGCTACAAGATTAAAGCAATTGCAGGATGAAGAGAAGAAAAAAGAAGAGCAGGAAGTTGAAAGGGTGGTTAAAGAGCCTCTTGAGGTTTATACTGCAGACTCAACAGAAAATCCACAACAACCTGCACAACAAGAAACACAGGATGCGCAGTTGAAAGAAAAACTATCAAATGAAAGTCAAACATCAGGACAATCATCTCAATCAACCAAGCCTTCAAAATTCAAAGTGGAAGATGAGCTTGGCAGGACAGTTGAATTAGAAGAATATGATGAACAAGAAGAGGGTAATAAAAATGCTGAAGAAAAATCTGGAGCCGAATCTCAAGAACTTCAGGATACTGATTCACCTCGACAAATATTTTCTGATACAAATTTTTCTCAAGAAACTGCAGATACAACTGCTGAAGAAGAATCTTCCCAAGACGAACATAAAACAAAATCTGCAGAGCCGATAATAAAGATCTCAGATGAAGAGGTAGATAAGAAAGTCAATGCATTGCTAAGCTCTACTGGCGACATAGGGTTATTGCATCATGAAGACCTCTCAGAAGAATGGGGCAGCTCAGAAACTAAAGTTCCTAAGGCTTCAAGCGATGAAGAAGAGCCAGATGACGAAGAGGAAAAAGCAGAGAAAGCAGAGTATTCAGACATAGATGAGGATTCTGGAGAAGAAGACCTTGAAGAGCTTCCTGAGGAAGAAAAGGAGAAAGAATCAGACTAA
PROTEIN sequence
Length: 447
MDEQVSEPKVQNTSQQKTSSQLPLLLRIEALLFAAARYVTIEELSGHTNASPSEIKAAIEELKKQLVNSNTSLNLLDQQTAVKLNVKDDYLPVVHKIIQTIEFEKPLMQTLAVIAWKYPALQADIIRIRHNKAYDHLMRLEELGFINRTRYGRTKKINLTQKFFEYFDLPSRKQAQQAFRESLPDEIKNQVEQTEKQIEETEKVIEEATRLKQLQDEEKKKEEQEVERVVKEPLEVYTADSTENPQQPAQQETQDAQLKEKLSNESQTSGQSSQSTKPSKFKVEDELGRTVELEEYDEQEEGNKNAEEKSGAESQELQDTDSPRQIFSDTNFSQETADTTAEEESSQDEHKTKSAEPIIKISDEEVDKKVNALLSSTGDIGLLHHEDLSEEWGSSETKVPKASSDEEEPDDEEEKAEKAEYSDIDEDSGEEDLEELPEEEKEKESD*