ggKbase home page

rifcsphigho2_02_scaffold_27011_2

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_37_9

near complete RP 35 / 55 MC: 3 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 1
Location: 253..1707

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=5048716 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 479.0
  • Bit_score: 691
  • Evalue 7.60e-196
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 479.0
  • Bit_score: 691
  • Evalue 1.10e-195
protein of unknown function UPF0027 similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 483.0
  • Bit_score: 643
  • Evalue 5.10e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 1455
ATGGTACCAAAAGAAATCATCAAGATAAACGACACAGTCTGGGAGCTTCCTACCAGTTACAAAGAAGGCATGAAAGTGCCTGCAAGGATATTTGCAACAGAAGAGCTTCTCAACCAGATGGATGATGCAGTCTTTAATCAGTTGACTAATGTAGCTTGCTTACCAGGAATACAGAAATACGCATACTGCATGGCAGACGGACATTCTGGATATGGATTTCCTATAGGCGGAGTTGCAGCATTTGATCCTGAAGTTGGGATAATTTCACCTGGAGGAATTGGATATGATATAAATTGCGGCATGCGCCTCATCAACACAAATCTCACATTAAAAGATGTCCAGCCAAAGATAAAAGAATTAGTTGACACATTATACAAGCTTGTTCCTGCAGGCGTTGGCGGCAAATCTACTTTGCATCTTGACAAAAAGCAGCTGGCAGAAGTCATGACAGATGGTGCTGCTTGGTGTGTTGAGAATGATTTAGGATGGAAACAGGATTTAGAAAGAATGGAGGAGAATGGGTGCATATCAGGAGCAGATCCTGCCAAAGTCAGTGAAAGAGCATTCTCTAGAGGATTTTCACAGCTAGGTACTTTGGGTTCTGGCAACCATTACTTAGAGATACAGGTCGCTAATGATGAAAATATATTTGACACAGAAATTGCGAAGAAATTAGGCATCACACAGAAAGACCAGATTTTAGTCATGGTTCATTGCGGTTCTAGAGGATTTGGCCATCAGGTTGGGACAGATTATCTTGAACTGTTTGAATCAGTGATGCGAAAATATAGCATCCATGTTCCTGATAGGGAATTAGCATGTGCGCCTTTCCAGAGCAAAGAAGGCCAGGATTATTTTAAGGCAATGGCTTGCGCAGCAAATCTTGCATTTACAAACAGGCAGGTTATAATGCACAAGATCAGGGAAGGATTTTCTCAAGTATTCAAGCAATCTCCAGAGAATTTAGGCATGGAACTTGTCTATGATGTCTGCCATAATATTGCAAAATTAGAGGAATATAAGATTGACGGCAAGAAGAAAACAGTTTTAGTGCACAGAAAAGGCGCAACAAGAGCGCTTGGCCCAGGAAGAAAAGAATTAGGTACACGCTTTAAAGAAACAGGACAGCCAGTAATAATTGGCGGCTCGATGGAAACTGGAAGCTACTTATTAGTTGGACAAGATAAATCTGATGATGAGACGTTTGGAAGCACTTGCCATGGCGCAGGCAGGACAATGTCACGTGCACAGGCAAAAAGAACCTGGCGAGGAGAGAAATTACAAAGTGACATGGAAAAAAGAGGTATTTACGTAAAAGCTGTCTCAATGCCTGGCTTAGCAGAAGAAGCAGGTGATGCTTACAAGAATGTTGACCATGTTGTTGATGCTATGGCAAAGGCTGGGATAACGAAGCCGGTAGTTGCGTTGAAGCCTATTGGAAACGTAAAAGGGTAA
PROTEIN sequence
Length: 485
MVPKEIIKINDTVWELPTSYKEGMKVPARIFATEELLNQMDDAVFNQLTNVACLPGIQKYAYCMADGHSGYGFPIGGVAAFDPEVGIISPGGIGYDINCGMRLINTNLTLKDVQPKIKELVDTLYKLVPAGVGGKSTLHLDKKQLAEVMTDGAAWCVENDLGWKQDLERMEENGCISGADPAKVSERAFSRGFSQLGTLGSGNHYLEIQVANDENIFDTEIAKKLGITQKDQILVMVHCGSRGFGHQVGTDYLELFESVMRKYSIHVPDRELACAPFQSKEGQDYFKAMACAANLAFTNRQVIMHKIREGFSQVFKQSPENLGMELVYDVCHNIAKLEEYKIDGKKKTVLVHRKGATRALGPGRKELGTRFKETGQPVIIGGSMETGSYLLVGQDKSDDETFGSTCHGAGRTMSRAQAKRTWRGEKLQSDMEKRGIYVKAVSMPGLAEEAGDAYKNVDHVVDAMAKAGITKPVVALKPIGNVKG*