ggKbase home page

CARFMA_116_1

Organism: Finegoldia magna

partial RP 23 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 0 / 38
Location: 2..604

Top 3 Functional Annotations

Value Algorithm Source
putative Zn-dependent hydrolase similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 200.0
  • Bit_score: 396
  • Evalue 4.50e-108
seg (db=Seg db_id=seg from=86 to=104) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
UPF0036 (db=PatternScan db_id=PS01292 from=9 to=37 evalue=0.0 interpro_id=IPR001587 interpro_description=Ribonuclease J, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788), Molecular Function: metal ion binding (GO:0046872)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Finegoldia magna → Finegoldia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 603
ATTTATTCTTCGTTGGCAGATGTCCATGTAAGTGGACACGCATGTCAAGAAGAATTGAAATTGATGCATTCATTAGTTAGACCTAAATTTTTTGTTCCACTTCACGGTGAAATGAGACATTTGAAGTGTCATGCGAATTTAGCACTAGATCTTGGAATGAACGAAAAAGATATAGTAATCGCTGATAATGGCAATACTATAGAATTTACTAGAAAAAGCATTAACCTTGTAGACACAAAATTTGCAAGTAATATTTTAGTAGATGGACTTGGAGTTGGTGATGTTGGAAATGTTGTATTACGAGACAGAAGACATTTATCAGAAGATGGACTAATAGTTGTAGTAATAACTTTAGATGCCAGAAACAAAGAAGTAATAGCTGGGCCTGACATCATTTCAAGAGGATTTGTATATGTAAAAGAAAATAATGATTTAATGGAAGATTGCAAATCTGTTGTACAAAAAGTTTTAGATGAATGTTATACAAAAAATATTTACGATTGGTCTACACTTAAACACAATATAAGAGAAACATTAAAGAAATTCTTATATCAAGAAATTAAGAGAAATCCAATGATATTGCCAGTAATAATGGAGGTATAA
PROTEIN sequence
Length: 201
IYSSLADVHVSGHACQEELKLMHSLVRPKFFVPLHGEMRHLKCHANLALDLGMNEKDIVIADNGNTIEFTRKSINLVDTKFASNILVDGLGVGDVGNVVLRDRRHLSEDGLIVVVITLDARNKEVIAGPDIISRGFVYVKENNDLMEDCKSVVQKVLDECYTKNIYDWSTLKHNIRETLKKFLYQEIKRNPMILPVIMEV*