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CARFMA_156_1

Organism: Finegoldia magna

partial RP 23 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 0 / 38
Location: 331..615

Top 3 Functional Annotations

Value Algorithm Source
Possible lipopolysaccharide chain length determining protein n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CI43_9FIRM (db=UNIREF evalue=2.0e-22 bit_score=107.0 identity=53.76 coverage=96.8421052631579) similarity UNIREF
DB: UNIREF
  • Identity: 53.76
  • Coverage: 96.84
  • Bit_score: 107
  • Evalue 2.00e-22
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 93.0
  • Bit_score: 104
  • Evalue 1.30e-20
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=63) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Anaerococcus tetradius → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 285
ATGGATATAGCAAATGAAACAGCAGAGATTTTCCAAAAAGATATCAAAACAATAATGCAAATAGATAATGTAAAGATTTTGGATGAAGCCGTGCTTCCACAAAAGCCATCTTCTCCTAAAATAAAGAGAAATACAGCACTGGGAGCTTTGCTAGGATTATTTATTTCATCATTTATGGCAGTATTCATAGAAATCAATGACACAAGGATAAAATCTGCAGAAGAATTACAAGAAAAATTCAACATACCAGTACTTGGTGTAATACCAGAAATTAAGGAGAAATAG
PROTEIN sequence
Length: 95
MDIANETAEIFQKDIKTIMQIDNVKILDEAVLPQKPSSPKIKRNTALGALLGLFISSFMAVFIEINDTRIKSAEELQEKFNIPVLGVIPEIKEK*