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CARFMA_336_2

Organism: Finegoldia magna

partial RP 23 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 0 / 38
Location: 240..443

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=29 to=40) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=29 evalue=9.0e-07 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.00e-07
HTH_3 (db=HMMPfam db_id=PF01381 from=7 to=29 evalue=1.3e-06 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-06

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Taxonomy

Finegoldia magna → Finegoldia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 204
ATGAGCTTTGGTGCTAAATTAAAACAACTCAGAGAAGACAGAGGTCTTACGCAGACGGAACTTGCGGACAAGCTTGGCGTGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGAAGGGCACTCGCCCACGCACGCAAGATATGTACAAGAAAATTGCGGAATTTTTCAATGTCGACATCAATTTTTTGTTGA
PROTEIN sequence
Length: 68
MSFGAKLKQLREDRGLTQTELADKLGVTXXXXXXXXXXXXXRRALAHARKICTRKLRNFSMSTSIFC*