ggKbase home page

CARFMA_347_1 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
ligA; NAD-dependent DNA ligase LigA rbh KEGG
DB: KEGG
96.1 507.0 982 3.70e-284 fma:FMG_0569
ligA; NAD-dependent DNA ligase LigA similarity KEGG
DB: KEGG
96.1 507.0 982 3.70e-284 fma:FMG_0569
DNA ligase n=2 Tax=Finegoldia magna RepID=DNLJ_FINM2 (db=UNIREF evalue=0.0 bit_score=934.0 identity=96.06 coverage=99.8027613412229) similarity UNIREF
DB: UNIREF
96.06 99.8 934 0.0 fma:FMG_0569
seg (db=Seg db_id=seg from=209 to=222) iprscan interpro
DB: Seg
null null null null fma:FMG_0569
seg (db=Seg db_id=seg from=143 to=161) iprscan interpro
DB: Seg
null null null null fma:FMG_0569
DNA_LIGASE_N2 (db=PatternScan db_id=PS01056 from=278 to=293 evalue=0.0 interpro_id=IPR018239 interpro_description=NAD-dependent DNA ligase, active site GO=Molecular Function: DNA ligase (NAD+) activity (GO:0003911), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: PatternScan
null null null 0.0 fma:FMG_0569
BRCT DOMAIN-CONTAINING PROTEIN (db=HMMPanther db_id=PTHR11107 from=2 to=507 evalue=1.8e-167) iprscan interpro
DB: HMMPanther
null null null 1.80e-167 fma:FMG_0569
no description (db=HMMSmart db_id=SM00532 from=1 to=392 evalue=6.8e-124 interpro_id=IPR013840 interpro_description=NAD-dependent DNA ligase, N-terminal GO=Molecular Function: DNA ligase (NAD+) activity (GO:0003911)) iprscan interpro
DB: HMMSmart
null null null 6.80e-124 fma:FMG_0569
dnlj: DNA ligase, NAD-dependent (db=HMMTigr db_id=TIGR00575 from=2 to=507 evalue=3.3e-119 interpro_id=IPR001679 interpro_description=NAD-dependent DNA ligase GO=Molecular Function: DNA ligase (NAD+) activity (GO:0003911), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMTigr
null null null 3.30e-119 fma:FMG_0569
DNA ligase/mRNA capping enzyme, catalytic domain (db=superfamily db_id=SSF56091 from=1 to=263 evalue=1.8e-74) iprscan interpro
DB: superfamily
null null null 1.80e-74 fma:FMG_0569
DNA_ligase_aden (db=HMMPfam db_id=PF01653 from=2 to=265 evalue=1.4e-72 interpro_id=IPR013839 interpro_description=NAD-dependent DNA ligase, adenylation GO=Molecular Function: DNA ligase (NAD+) activity (GO:0003911)) iprscan interpro
DB: HMMPfam
null null null 1.40e-72 fma:FMG_0569
RuvA domain 2-like (db=superfamily db_id=SSF47781 from=349 to=507 evalue=2.4e-52 interpro_id=IPR010994 interpro_description=RuvA domain 2-like) iprscan interpro
DB: superfamily
null null null 2.40e-52 fma:FMG_0569
no description (db=Gene3D db_id=G3DSA:3.30.470.30 from=74 to=199 evalue=1.3e-32) iprscan interpro
DB: Gene3D
null null null 1.30e-32 fma:FMG_0569
DNA_ligase_OB (db=HMMPfam db_id=PF03120 from=268 to=343 evalue=8.6e-26 interpro_id=IPR004150 interpro_description=NAD-dependent DNA ligase, OB-fold GO=Molecular Function: DNA ligase (NAD+) activity (GO:0003911), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMPfam
null null null 8.60e-26 fma:FMG_0569
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=264 to=349 evalue=2.8e-24 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
null null null 2.80e-24 fma:FMG_0569
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=266 to=338 evalue=9.0e-21 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
null null null 9.00e-21 fma:FMG_0569
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=379 to=447 evalue=8.3e-19) iprscan interpro
DB: Gene3D
null null null 8.30e-19 fma:FMG_0569
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=448 to=507 evalue=3.7e-14) iprscan interpro
DB: Gene3D
null null null 3.70e-14 fma:FMG_0569
DNA_ligase_ZBD (db=HMMPfam db_id=PF03119 from=353 to=376 evalue=6.7e-06 interpro_id=IPR004149 interpro_description=Zinc-finger, NAD-dependent DNA ligase C4-type GO=Molecular Function: DNA ligase (NAD+) activity (GO:0003911), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMPfam
null null null 6.70e-06 fma:FMG_0569
no description (db=HMMSmart db_id=SM00278 from=488 to=507 evalue=2.7 interpro_id=IPR003583 interpro_description=Helix-hairpin-helix DNA-binding motif, class 1 GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMSmart
null null null 2.70e+00 fma:FMG_0569
no description (db=HMMSmart db_id=SM00278 from=424 to=443 evalue=7.7 interpro_id=IPR003583 interpro_description=Helix-hairpin-helix DNA-binding motif, class 1 GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMSmart
null null null 7.70e+00 fma:FMG_0569
no description (db=HMMSmart db_id=SM00278 from=390 to=409 evalue=120.0 interpro_id=IPR003583 interpro_description=Helix-hairpin-helix DNA-binding motif, class 1 GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMSmart
null null null 1.20e+02 fma:FMG_0569
no description (db=HMMSmart db_id=SM00278 from=456 to=475 evalue=2000.0 interpro_id=IPR003583 interpro_description=Helix-hairpin-helix DNA-binding motif, class 1 GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMSmart
null null null 2.00e+03 fma:FMG_0569
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=525282 species="Bacteria UNIPROT
DB: UniProtKB
98.8 507.0 1000 6.60e-289 D6SA33_FINMA
DNA ligase n=5 Tax=Peptostreptococcus magnus RepID=DNLJ_FINM2 similarity UNIREF
DB: UNIREF90
96.1 null 982 5.40e-284 fma:FMG_0569