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13_2_20cm_2_scaffold_272920_2

Organism: 13_2_20CM_2_Nitrospirae_61_4

partial RP 40 / 55 MC: 12 BSCG 33 / 51 MC: 8 ASCG 9 / 38 MC: 2
Location: 372..1082

Top 3 Functional Annotations

Value Algorithm Source
TrmA family RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 192.0
  • Bit_score: 148
  • Evalue 9.60e-33
RNA-methyltransferase similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 221.0
  • Bit_score: 137
  • Evalue 4.50e-30
RNA methyltransferase id=3692979 bin=GWC2_Nitrospirae_57_13 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 202.0
  • Bit_score: 137
  • Evalue 1.60e-29

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Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 711
ATGGGCGAATCCCTGCAAGCAGGCGACGACCGGCTGCTCACCATCGAAAAGCTGGTTCATGGGGGCAAAGGGCTTGCCCACGATGGATCGCTGGCAGTCTTTCTGCCGCGTGTTCTGCCCGGGGAGCGGGTGCGCGTGCTGCTCGATCGGCCCCGAAAAGGGTATGCGCAGGGGCAGCTGCTTGACGTTGTTACCCCCTCCGGTGATCGGATCACGCCTCCATGTCCGGTTTACGGACAGTGCGGCGGCTGCCAATTACAGCACGCCACGCCTGACGCGCAACTCGAGCTTAAACGGACAATCCTCAGCGAAACCCTCGCCCGGATTGGCGGATTGCGCGATCTGAATGTCCCTCCCCTAATCCCTTCGCCCGAGAATTTTGGATACCGCAGCCGGGCTAGATTTGCGGTCCTTCGCGATGACCAGGGAAAGGCTGCTTTGGCATATCACGAAGAGGGAAGTCCGCGGCTGGTCGCTATCACCGAGTGTCTGTTATTGGCACCCCCGCTGAATCGCATGCTGGGCGCTCTCAATAGGCTCCTGACCTGGTCTGAGAAGATGCGCCTTCAGGAAGTCACCGTCACCGTCTCGAACGGTACTGAAGAGGTCGTGAATCAATATTTCGCGGAGCGAGCGACCGGCCGCGAGGCCAAAGCGTGGTTCGACAGGGTTGGAGAAGATGGGCCGATCAGAGGTCAGGCGTTAATAGCG
PROTEIN sequence
Length: 237
MGESLQAGDDRLLTIEKLVHGGKGLAHDGSLAVFLPRVLPGERVRVLLDRPRKGYAQGQLLDVVTPSGDRITPPCPVYGQCGGCQLQHATPDAQLELKRTILSETLARIGGLRDLNVPPLIPSPENFGYRSRARFAVLRDDQGKAALAYHEEGSPRLVAITECLLLAPPLNRMLGALNRLLTWSEKMRLQEVTVTVSNGTEEVVNQYFAERATGREAKAWFDRVGEDGPIRGQALIA