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13_2_20cm_2_scaffold_31253_5

Organism: 13_2_20CM_2_Nitrospirae_61_4

partial RP 40 / 55 MC: 12 BSCG 33 / 51 MC: 8 ASCG 9 / 38 MC: 2
Location: 1955..2959

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 333.0
  • Bit_score: 477
  • Evalue 3.30e-132
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL: similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 333.0
  • Bit_score: 477
  • Evalue 1.70e-131
DNA-directed RNA polymerase subunit alpha n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCY0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 333.0
  • Bit_score: 477
  • Evalue 1.20e-131

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1005
ATGCTGAAGGGAATGCGTGATTTTCAGGTACCAACGAAGGTCGAAGTCGACAAAGAGAGCTTGACCGCGACCTACGGGCGGTTTACCGCCGAACCGTTCGAGCGTGGGTTCGGCACGACTGTCGGCAATTCACTGCGTCGGGTCTTGCTGTCCTCGCTGTCTGGTGCAGCCGTCGTGTCCGTCAAAATCGAGGGCGTCCTGCACGAATTCTCCACGATGCCCGGTATCACCGAAGACGTCACTGACATCATTCTCAACGTCAAGAAAATCCGGTTCAAACTGCATGCCGATAAGACCAAGTCCATTCGCCTGCGCAAGAAAGGGCCAGGGGTCGCCAAAGCCGGCGACGTGGAGCACGATGCGGACATCGAGATCCTGACTCCTGACCTTCACATTGCCACCCTGGACAAGGGCGCCGTCCTGGACATGGAGATCGTCGTCAAGCACGGGCGCGGGTATGTCTCGGCAGAACGGAACAAGGAAGAAGGCATGCGCATCGGCGTGATTCCCGTGGACGCCTTCTACTCTCCGGTCACCCGCGTGAACTACCTGGTGGAGAACGCACGCGTTGGGCGGATGACCGACTATGATAAGTTGATTCTGGAAGTCTGGACCGACGGGAGCGTCTCGCCCGAGGACGCGCTGTCGTCCGCCGCGTTGATCGTGCGTGGCCATCTCGAAATCTTCATCAAGGTCAAAGACATGGAAGAGGCGCTCGTGCAGCCGGTGGCTGAGGAAACCATCACGGAAATCAACAAAAACCTCTTGCGCAGCGTCAATGAGCTGGAGCTCTCCGTGAGGGCCGCCAATTGCTTGAAGAACGCCAACATCAAGACCATCGCGGATCTCGTGCAGAAGACGGAATCCGACATGCTGCGGACCAAGAATTTCGGCAAAAAATCACTCAATGAGATCAAGGAAATCCTCGCCGAGATGGGGCTGAGCCTCGGCATGAAGCTGGATCATCTCCCGCAAGGAACTGGTTCGGAAACGAGAGAGGGGTAA
PROTEIN sequence
Length: 335
MLKGMRDFQVPTKVEVDKESLTATYGRFTAEPFERGFGTTVGNSLRRVLLSSLSGAAVVSVKIEGVLHEFSTMPGITEDVTDIILNVKKIRFKLHADKTKSIRLRKKGPGVAKAGDVEHDADIEILTPDLHIATLDKGAVLDMEIVVKHGRGYVSAERNKEEGMRIGVIPVDAFYSPVTRVNYLVENARVGRMTDYDKLILEVWTDGSVSPEDALSSAALIVRGHLEIFIKVKDMEEALVQPVAEETITEINKNLLRSVNELELSVRAANCLKNANIKTIADLVQKTESDMLRTKNFGKKSLNEIKEILAEMGLSLGMKLDHLPQGTGSETREG*