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13_2_20cm_2_scaffold_88111_5

Organism: 13_2_20CM_2_Nitrospirae_61_4

partial RP 40 / 55 MC: 12 BSCG 33 / 51 MC: 8 ASCG 9 / 38 MC: 2
Location: 2556..2846

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBZ3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 97.0
  • Bit_score: 110
  • Evalue 1.10e-21
rpoD; RNA polymerase sigma factor RpoD (Sigma-70); K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 102.0
  • Bit_score: 112
  • Evalue 4.10e-22
rpoD; RNA polymerase sigma factor RpoD (Sigma-70) similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 97.0
  • Bit_score: 110
  • Evalue 3.10e-22

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Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 291
ATGGCTGAAGAAGAACGGACGCCCGAAGTCAATCGCCTGATTATCCTGGGGAAGGAAAAGGGCTTCCTGACCTACGGCGATTTGAACAACACCTTGCCTGCGGAGATGGCGACAACTGAGCGGATCACCAGTTTGATGGTGATGTTCGGCGAGATGGATATCGAGGTCATCGACTCTCCGGAGGGGGAGCGCTATCAGCGGATGCCGTCCGAAGGGGAAGGCGGGGCGGAAGAGAGCGAAGAACAGGAAGAGGCGGAAGAGGAAGATAAGAAGATCGATCTGACGCCCGGC
PROTEIN sequence
Length: 97
MAEEERTPEVNRLIILGKEKGFLTYGDLNNTLPAEMATTERITSLMVMFGEMDIEVIDSPEGERYQRMPSEGEGGAEESEEQEEAEEEDKKIDLTPG