Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
hypothetical protein | rbh |
KEGG
DB: KEGG |
60.6 | 701.0 | 866 | 5.60e-249 | wwe:P147_WWE3C01G0025 |
hypothetical protein | similarity |
KEGG
DB: KEGG |
60.6 | 701.0 | 866 | 5.60e-249 | wwe:P147_WWE3C01G0025 |
Polyribonucleotide nucleotidyltransferase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSB4_9GAMM (db=UNIREF evalue=2.0e-149 bit_score=533.0 identity=46.33 coverage=93.9643347050754) | similarity |
UNIREF
DB: UNIREF |
46.33 | 93.96 | 533 | 2.00e-149 | wwe:P147_WWE3C01G0025 |
seg (db=Seg db_id=seg from=430 to=452) | iprscan |
interpro
DB: Seg |
null | null | null | null | wwe:P147_WWE3C01G0025 |
seg (db=Seg db_id=seg from=667 to=681) | iprscan |
interpro
DB: Seg |
null | null | null | null | wwe:P147_WWE3C01G0025 |
polynuc_phos: polyribonucleotide nucleot (db=HMMTigr db_id=TIGR03591 from=10 to=697 evalue=4.4e-283 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 4.40e-283 | wwe:P147_WWE3C01G0025 |
POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE (db=HMMPanther db_id=PTHR11252 from=145 to=724 evalue=3.2e-179 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 3.20e-179 | wwe:P147_WWE3C01G0025 |
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=325 to=461 evalue=1.7e-40 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.70e-40 | wwe:P147_WWE3C01G0025 |
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=1 to=144 evalue=1.3e-36 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.30e-36 | wwe:P147_WWE3C01G0025 |
Ribonuclease PH domain 2-like (db=superfamily db_id=SSF55666 from=456 to=565 evalue=3.5e-24 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.50e-24 | wwe:P147_WWE3C01G0025 |
no description (db=HMMSmart db_id=SM00316 from=625 to=695 evalue=4.7e-24) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 4.70e-24 | wwe:P147_WWE3C01G0025 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=613 to=696 evalue=9.4e-24 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 9.40e-24 | wwe:P147_WWE3C01G0025 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=622 to=697 evalue=4.0e-21 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 4.00e-21 | wwe:P147_WWE3C01G0025 |
S1 (db=HMMPfam db_id=PF00575 from=625 to=695 evalue=3.9e-18 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.90e-18 | wwe:P147_WWE3C01G0025 |
RNase_PH (db=HMMPfam db_id=PF01138 from=326 to=459 evalue=5.5e-18 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.50e-18 | wwe:P147_WWE3C01G0025 |
Ribonuclease PH domain 2-like (db=superfamily db_id=SSF55666 from=145 to=241 evalue=9.8e-18 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
null | null | null | 9.80e-18 | wwe:P147_WWE3C01G0025 |
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=557 to=610 evalue=6.0e-14 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: superfamily |
null | null | null | 6.00e-14 | wwe:P147_WWE3C01G0025 |
RNase_PH (db=HMMPfam db_id=PF01138 from=14 to=144 evalue=1.3e-12 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.30e-12 | wwe:P147_WWE3C01G0025 |
KH_1 (db=HMMPfam db_id=PF00013 from=564 to=615 evalue=1.1e-10 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.10e-10 | wwe:P147_WWE3C01G0025 |
no description (db=HMMSmart db_id=SM00322 from=557 to=622 evalue=2.2e-10 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.20e-10 | wwe:P147_WWE3C01G0025 |
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 (db=superfamily db_id=SSF46915 from=231 to=329 evalue=5.1e-10 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.10e-10 | wwe:P147_WWE3C01G0025 |
RNase_PH_C (db=HMMPfam db_id=PF03725 from=147 to=213 evalue=8.2e-07 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 8.20e-07 | wwe:P147_WWE3C01G0025 |
no description (db=Gene3D db_id=G3DSA:3.30.1370.10 from=559 to=621 evalue=0.00013) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.30e-04 | wwe:P147_WWE3C01G0025 |
RNase_PH_C (db=HMMPfam db_id=PF03725 from=463 to=533 evalue=0.0002 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.00e-04 | wwe:P147_WWE3C01G0025 |
KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=558 to=617 evalue=12.978 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.30e+01 | wwe:P147_WWE3C01G0025 |
S1 (db=ProfileScan db_id=PS50126 from=627 to=695 evalue=21.394 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.14e+01 | wwe:P147_WWE3C01G0025 |
PNPase (db=HAMAP db_id=MF_01595 from=3 to=698 evalue=25.368 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 2.54e+01 | wwe:P147_WWE3C01G0025 |
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=77133 |
UNIPROT
DB: UniProtKB |
100.0 | 728.0 | 1416 | 0.0 | K2D2E4_9BACT | |
gwc:GWCH70_1161 polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] alias=ACD22_72.27511.20G0004,ACD22_72.27511.20_4,ACD22_C00086G00004 id=23430 tax=ACD22 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=WWE3 organism_desc=WWE3 | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 1416 | 0.0 | wwe:P147_WWE3C01G0025 |