Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
Ribosomal protein S13 | similarity |
KEGG
DB: KEGG |
64.8 | 128.0 | 169 | 7.50e-40 | wwe:P147_WWE3C01G0044 |
30S ribosomal protein S13 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN7_9FIRM (db=UNIREF evalue=2.0e-33 bit_score=144.0 identity=65.77 coverage=84.4961240310078) | similarity |
UNIREF
DB: UNIREF |
65.77 | 84.5 | 144 | 2.00e-33 | wwe:P147_WWE3C01G0044 |
seg (db=Seg db_id=seg from=112 to=128) | iprscan |
interpro
DB: Seg |
null | null | null | null | wwe:P147_WWE3C01G0044 |
RIBOSOMAL_S13_1 (db=PatternScan db_id=PS00646 from=89 to=102 evalue=0.0 interpro_id=IPR018269 interpro_description=Ribosomal protein S13, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | wwe:P147_WWE3C01G0044 |
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=3 to=116 evalue=9.0e-66 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 9.00e-66 | wwe:P147_WWE3C01G0044 |
30S/40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR10871 from=1 to=124 evalue=2.2e-51) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.20e-51 | wwe:P147_WWE3C01G0044 |
30S RIBOSOMAL PROTEIN S13 (db=HMMPanther db_id=PTHR10871:SF1 from=1 to=124 evalue=2.2e-51) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.20e-51 | wwe:P147_WWE3C01G0044 |
Ribosomal protein, S13p/S13a/S18e/organellar S13 types (db=HMMPIR db_id=PIRSF002134 from=1 to=125 evalue=1.3e-47 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 1.30e-47 | wwe:P147_WWE3C01G0044 |
S13-like H2TH domain (db=superfamily db_id=SSF46946 from=2 to=127 evalue=1.1e-39 interpro_id=IPR010979 interpro_description=Ribosomal protein S13-like, H2TH GO=Molecular Function: nucleic acid binding (GO:0003676)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.10e-39 | wwe:P147_WWE3C01G0044 |
Ribosomal_S13 (db=HMMPfam db_id=PF00416 from=3 to=110 evalue=3.2e-33 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.20e-33 | wwe:P147_WWE3C01G0044 |
no description (db=Gene3D db_id=G3DSA:4.10.910.10 from=74 to=127 evalue=9.4e-18) | iprscan |
interpro
DB: Gene3D |
null | null | null | 9.40e-18 | wwe:P147_WWE3C01G0044 |
no description (db=Gene3D db_id=G3DSA:1.10.8.50 from=1 to=73 evalue=1.6e-17) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.60e-17 | wwe:P147_WWE3C01G0044 |
RIBOSOMAL_S13_2 (db=ProfileScan db_id=PS50159 from=4 to=113 evalue=37.126 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 3.71e+01 | wwe:P147_WWE3C01G0044 |
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 128.0 | 250 | 9.70e-64 | K2EM88_9BACT |