ggKbase home page

13_1_40cm_4_scaffold_1172_2

Organism: 13_1_40CM_4_Actinobacteria_65_12

partial RP 17 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 6 / 38
Location: 114..1712

Top 3 Functional Annotations

Value Algorithm Source
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 504.0
  • Bit_score: 773
  • Evalue 2.30e-220
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 432.0
  • Bit_score: 472
  • Evalue 7.90e-130
h16_A2949; ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 30.5
  • Coverage: 508.0
  • Bit_score: 215
  • Evalue 3.80e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGAACGGTCGACGACACCTTCCATTGGGGTTCGCGCTCACCTCAATCGGCCTGTCGTTCGTTCTCCTCTTCGGCGGTCTCCTCGGGGAAGCGACTGGCCAGCCGAAACCAGAAGGGGAGATGCGTTGGGCATTATACGTGACCCTCTCCCCCGTCTGGTTCGATCCAGGCGAAGTGGTGGGCCTTATCACGCCCTTCTGGGTGCTGTATGCCATTCACGACGCGCTGGTCAAGCCCATGCCCGGTCAGCCGATGGCGCCAAGCCTGGCCGACTCATGGACAGTGAGCGCGGACCAGCGCGTCTACGAGTTCAAACTGCGCGAGGGCCTGAAGTTTCACAACGGCGATTCCTTCACCGCCGAGGACGTGAAGTTCAGCTTCCACCGGTCCAAGGGCGCCAGGATCCTCAAGGAGAAGGTCCGCGACGTCGAGGTCGTCGGTCCATATCGTGTGCGGTTCCACCTGCTCGAGCCGTTCCCCGATTTCATGGCCTTCTACGGGACGCTCGCGACCGGCGCCGCCTGGATCGTCCCGAAGAAGTACGTCGAGCAGGTGGGCCTCGACGCCTTCAAGAAGCAACCGATTGGTCTCGGGCCATACAAGTTCGTGAGCCACACACCCGGCGTCGAGTTGATCATGGAGGCTTTCGAGGGCTACTGGCGCAAGGTGCCCTCGGTGAAGCGGCTGGTCTTCAAGAGTGTGCCGGAGGCCACGACGCGGGCGGCGATGCTGAAGCGGGGCGAAGTCGACGTCGCCTACCTGCTGGATGCGCCGCAGGCCCTGGAGCTTCAACGGGATCCCACTCTGAAGCTGGCCTTCTCGGGCGGGATCGGCGTGTTCTTCCTGGATTTCTTCGATCAGTGGGACCCGAAGTCTCCTTGGGCCGACAGGCGCGTGCGGCTCGCTGCCAACTATGCCATCGATCGTCGCGCGCTGAGCGAGGCGGAGACGCTCGGGGCCTCTAAGCCCACCGGCAACATCATCCCTCGCGCCTTCGAGTTTGCGCTGCCGATCGAGCCTTACCCGTACGATCCGGCGAAGGCGAAGCAGCTGCTGGCCGAGGCGGGCTACCCCAACGGGTTCGACGCCGGGGAATTGCATCAGATCCCTCCTTACTTCTCGATGGGCGAAACGATCATGGGGTATCTCGGCGCCGTCGGGTTCAGGCTCAAGATGCGCCCGATGGAGCGGGCCGCGTTCTTCTCGGCCTGGGCGACCAAGAAGCTACGAGGGGTGTGTGTCTGCGCCAGCGCGCTCTACGGCAACGCCGCCACGCGCATGTCTGAGATCGTGCCGAGTGACGGGGCGTATGCCTATGGCGGCTATCCCGACATCGACACGCTGTACAAGCAGCAGGCCCGCGAGATCGACCGAAAGAAGCGTGAAGCTCTGCTGCACCAGATTCAGCAAACGCTCCACGACCGGGTGAGATTCGGGCCGATCTGGGAATACATCTGGCCGAGTGGCATCGGGCCGCGGGTTTCGGAGCCCGCGCTGATGCTGATCAACCCCTCTATCCGTGGTCGGCACCGCTCGAAGAGGTGCGCCTCAAGTGAAGAATGGCCTTCAGCGAGAGAACACGCGGGGCGGGAACGTTAG
PROTEIN sequence
Length: 533
MNGRRHLPLGFALTSIGLSFVLLFGGLLGEATGQPKPEGEMRWALYVTLSPVWFDPGEVVGLITPFWVLYAIHDALVKPMPGQPMAPSLADSWTVSADQRVYEFKLREGLKFHNGDSFTAEDVKFSFHRSKGARILKEKVRDVEVVGPYRVRFHLLEPFPDFMAFYGTLATGAAWIVPKKYVEQVGLDAFKKQPIGLGPYKFVSHTPGVELIMEAFEGYWRKVPSVKRLVFKSVPEATTRAAMLKRGEVDVAYLLDAPQALELQRDPTLKLAFSGGIGVFFLDFFDQWDPKSPWADRRVRLAANYAIDRRALSEAETLGASKPTGNIIPRAFEFALPIEPYPYDPAKAKQLLAEAGYPNGFDAGELHQIPPYFSMGETIMGYLGAVGFRLKMRPMERAAFFSAWATKKLRGVCVCASALYGNAATRMSEIVPSDGAYAYGGYPDIDTLYKQQAREIDRKKREALLHQIQQTLHDRVRFGPIWEYIWPSGIGPRVSEPALMLINPSIRGRHRSKRCASSEEWPSAREHAGRER*