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13_1_40cm_4_scaffold_12431_5

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(2204..2404)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_16_Actinobacteria_67_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 66.0
  • Bit_score: 119
  • Evalue 2.30e-24
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 66.0
  • Bit_score: 111
  • Evalue 9.50e-23
Cold-shock DNA-binding domain protein id=2785126 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 67.0
  • Bit_score: 111
  • Evalue 2.60e-22

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Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGGCAAAGGGTAAGGTGAAGTGGTTTAACGACGCGAAGGGCTTTGGCTTTATCGCGCAGGAGTCGGGTCCAGACGTGTTCGTGCACTTCACGGCGATCCAGGCAGAGGGCTTCCGCAGCCTCGCCGAGGGCGACAACGTCGAGTTCGACGTGGCTCAGGGTCCGAAAGGGCTGCAGGCGCAGAACGTCCGCAAGGTCTGA
PROTEIN sequence
Length: 67
MAKGKVKWFNDAKGFGFIAQESGPDVFVHFTAIQAEGFRSLAEGDNVEFDVAQGPKGLQAQNVRKV*