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13_1_40cm_4_scaffold_1948_11

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(8988..10670)

Top 3 Functional Annotations

Value Algorithm Source
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 567.0
  • Bit_score: 275
  • Evalue 8.80e-71
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 476.0
  • Bit_score: 400
  • Evalue 3.30e-108
methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 567.0
  • Bit_score: 275
  • Evalue 2.50e-71

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1683
ATGAGTGGCCTCGATACGATCCGCTGGCGGATCATTCTGGGCCTTTCCGGCCTCCTCGCCGGGCTGGTGATCTCCGCCGTCGTGGGAGTGACCTCGCTAGCCACGTTGCGGCGCTCGCTGGCAACGGAGATCGACCATCTCCGCGCATCGAGTGCGGTCGGCAGCGGGCTCGTCAGTGCGATCTTCGATGAAATCCGCTCCGCGGAACAGCTGGGCGCAGGGAGCGCTGATCAGTTTCAGACCGCCGTAGACGCCGCCTTTCGGTATCAGAAGCAGCTCGATGAACTGCCCGGGCTCACGGAGACTGATCGCATCACGGTCAATCGTATCAAGCAGCTGCAAGCGGCGATCCATGTCGATTACTCGCTGTCGCACGCCCTCCTCGATCTGGGGCGAACGGTCCAGGCGCAGGCGCTCATCGGGCAGGTGCGCGAGCCTGTGGCCGAGCTCACACGCCTGGTGCGCGAGCTGTCGGCGCGGCAATCGGACAAGGCGACCGCCGCCGGTCAGCGCCTCGCCGCGCAGGCGCGCGAGCGCGAGATCATTCTCTGGATCGTGTTGCTCGCCACGGCCATCGTGGGGGCGATTGTCGGAGCGTTCACGGTTCGCTGGGTCGAGGGGCCGTTGGTCCGGCTGGTCACGGCGGCCGAGCGGTTCGGCAGCGGAGATCTGCGGCCGGTGACGACCGGGCGAATGCCCCGTGAATTCCAGGTGCTGGCCGACGCTATGCGACAGATGGGCGAACGCCTCCGGGGGATCGTCTCCGAGGTCGTCGGCTCGGCTGACAAAATCGCGACCTCAGCCGGTGACCTCTCGGCGGTCAGTGAAGAGCTGGCCGCGTCGTCGAGCGAAGTCTCTACCGCGATGCTCGAGATCTCGACGGGCGCGGAATATCAGCGCAACCAGCTGAACGAGACGGAGTCCGCGCTGGCGCAGCTGCGGCGCGCGACCACTGAAATGGCCGATGCCGCGGCGCGCGTCGCGAGACTGGGAGAAGAGATCCGCACCGTGGCCGACCGGCATCGCAACGACATCGCCGCCGCCGGCACGACGCTGCTCGACGTCCGAGAGGTGGTCCGGACGACCGGCACGGAGGTAACACAGCTCGCCGAGCAAAGCACGGCAATCGACGATTTCGTCGACCTGATTAAGCGCATCTCGTCACAGACCAACCTGCTGGCGCTCAATGCGGCGATCGAGGCCGCCCGCGCGGGGGAGCATGGCCGCGGCTTCGCCGTCGTCGCCGAGGAAGTGCGGCAGCTCGCAGACGAATCGGCGCGCGCCGCGGAGGACGTCGCTCGGACGACGCGCGTGATCCGCGAGCAGGTGGAAGAGGTCACGGCCACGATGGCGGTGGGACAGGCAAAGGTGCGCGGCATCGAATCGGTCGCGGAGGGAGCGGCACGCGGGCTCACCGAGATCGTCGCCGCCGTCGAACAAGTCGAACAGGCGGCCGCGCGCGTCACGAAGGCGGCACAGGAGAACCGTGGCGTCACGGAGCAGCTCGGCGCGCAGGCACAGCAGGTGGTGAGCCGTGCGGTCTCACACGCGTCGAGCGCGGAGCAAGTGACGGCCGCGACGGAGCAACAGGGAGCATCGACTCAGCAAATGGCTGCGGCCGCCGGAGATCTGCTTCAGGCGGCCGAAAAACTACGTGGCTTGGTGCGCGGTTTCCGGATTTAG
PROTEIN sequence
Length: 561
MSGLDTIRWRIILGLSGLLAGLVISAVVGVTSLATLRRSLATEIDHLRASSAVGSGLVSAIFDEIRSAEQLGAGSADQFQTAVDAAFRYQKQLDELPGLTETDRITVNRIKQLQAAIHVDYSLSHALLDLGRTVQAQALIGQVREPVAELTRLVRELSARQSDKATAAGQRLAAQAREREIILWIVLLATAIVGAIVGAFTVRWVEGPLVRLVTAAERFGSGDLRPVTTGRMPREFQVLADAMRQMGERLRGIVSEVVGSADKIATSAGDLSAVSEELAASSSEVSTAMLEISTGAEYQRNQLNETESALAQLRRATTEMADAAARVARLGEEIRTVADRHRNDIAAAGTTLLDVREVVRTTGTEVTQLAEQSTAIDDFVDLIKRISSQTNLLALNAAIEAARAGEHGRGFAVVAEEVRQLADESARAAEDVARTTRVIREQVEEVTATMAVGQAKVRGIESVAEGAARGLTEIVAAVEQVEQAAARVTKAAQENRGVTEQLGAQAQQVVSRAVSHASSAEQVTAATEQQGASTQQMAAAAGDLLQAAEKLRGLVRGFRI*