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13_1_40cm_4_scaffold_435_4

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(2710..3252)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 175.0
  • Bit_score: 203
  • Evalue 1.80e-49
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 179.0
  • Bit_score: 272
  • Evalue 1.20e-70
RNA polymerase ECF-type sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 179.0
  • Bit_score: 272
  • Evalue 5.70e-70

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 543
GTGGACGAAACACAGCTGATAGCCCGCGTCCGCGCCGGGGACAGCGCCGCAGAGCGAGCGCTCTATGACGCCCATGTGGATCGGGTGTACCGCCTGGCGTTCCGGCTCGCGGGTGACGACACACTCGCGCAGGATTTCACCCAGGAAACGTTCATCCGGGCATTCGACCGGCTCGGCTCGTTCCGTGGCGACGCCGCCTTTTCGACGTGGCTGCACGCCATCACGACGACCGTCGTGCTGAACGGATTGCGCAAGATGAAGCGGTTTCGCCAGCGTGAAGCAGACATCGATGACGCGCAGAGCATTGGCGTGACGCGTCGAGACGCGGAGCCGGATCTGAAAACGCGACTCAAGAAAGCGATCGACGCATTGCCGGAGGGTTACCGCACGGTGTTTGTCATGCACGACGTCGAAGGCTATACACACGAGGAAATCGGCGCGGCATTGGGCGTCGAGACCGGCACCTCGAAGGCGCAGCTGTCGCGCGCGCGGGCCAAACTGCGCGTGGCGTTGTCGGATTTCGCGGGAGAGTGGGTACCATGA
PROTEIN sequence
Length: 181
VDETQLIARVRAGDSAAERALYDAHVDRVYRLAFRLAGDDTLAQDFTQETFIRAFDRLGSFRGDAAFSTWLHAITTTVVLNGLRKMKRFRQREADIDDAQSIGVTRRDAEPDLKTRLKKAIDALPEGYRTVFVMHDVEGYTHEEIGAALGVETGTSKAQLSRARAKLRVALSDFAGEWVP*