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13_1_40cm_4_scaffold_6227_5

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 2894..3661

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Y6_PEDSD id=5223268 bin=16ft_combo_ws3_JS1 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 245.0
  • Bit_score: 162
  • Evalue 6.50e-37
photosynthetic reaction centre cytochrome c subunit KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 249.0
  • Bit_score: 184
  • Evalue 4.50e-44
Photosynthetic reaction centre cytochrome c subunit {ECO:0000313|EMBL:AHG88272.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 249.0
  • Bit_score: 184
  • Evalue 2.20e-43

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 768
ATGTGTGATGCCATGACACTGCGCCCCGTTGCCTTCTGCGTCGCTCTCCTTGCCGCCCCTGCCGTCCTTGCTTCGCAAGCGCAGGGCCACTTCCCGCCCGACTCGCTGATCAACGTCAAGGTGATTCCCAAGAATACGCCCGTCATGCAAGTCATCGGCATGATGCGCAACTTCACGGGCGCCCTCGGCGTGCGCTGCCCCTTCTGTCACGTCGGTCAGGAAGGGCAGCCGCTCGCCAGCTTCGACTTCGCCAAGGACGAGAAGCGTACCAAGCTCACCGCTCGGCAAATGATGCGCATGGTGGAAGAGGTCAATCACCGGCTCGACACGCTGCCCGAGCACGAGAAGATGGCCTCGCACGTCGAGGTCACGTGCGCAACGTGCCACCGCGGTGTGAACCGGCCGATGCCGCTCGAGCAGCTCATTCAGGAGACGGCGACGACGGCAGGCGTGGACTCGGCGAGTCGCGCCTATCGCGCGTTGCGCGAGCGCTATTACGGCCGCGCGGCGTACGATTTCGGGGAGCCGACGCTGGACGTGGCGGCCTTCCGGCTGGGGCGCGCCGGAAAATTCGTCGAGGCTTTCGCGATCCTCAAGCTGAACGAGGATCAATTCCCCACGTCGTCGAACCTCGCGACGTTCCGCGGCAACATCAACGTGATGAAGGGTGATACCGCTGCCGCGGTCGCCGCGTTCAGAGAGGCGGTGCGCCGCGACTCGACGAACGGGGAGGCGCAGGGGCGGCTGCGCCAGCTTACTCGACCGTAG
PROTEIN sequence
Length: 256
MCDAMTLRPVAFCVALLAAPAVLASQAQGHFPPDSLINVKVIPKNTPVMQVIGMMRNFTGALGVRCPFCHVGQEGQPLASFDFAKDEKRTKLTARQMMRMVEEVNHRLDTLPEHEKMASHVEVTCATCHRGVNRPMPLEQLIQETATTAGVDSASRAYRALRERYYGRAAYDFGEPTLDVAAFRLGRAGKFVEAFAILKLNEDQFPTSSNLATFRGNINVMKGDTAAAVAAFREAVRRDSTNGEAQGRLRQLTRP*