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13_1_40cm_4_scaffold_8086_1

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 170..814

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 195.0
  • Bit_score: 289
  • Evalue 2.30e-75
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 214.0
  • Bit_score: 360
  • Evalue 1.50e-96
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 202.0
  • Bit_score: 307
  • Evalue 3.80e-81

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 645
ATGCGGACCACTCTGAAGCGTCCAACGCCGGCCGTCGACACCACGCGAGCTCTGCAGCGGGAAGCGCTGCACGAACTGGATGACGGTCAGGTCGTGATGCGGCATCTGGCAGGTGAGCCGCAGGCCTTCGGAACCCTCGTCGACCGCTATCAGACCCGTCTACTGAACTTCGTCAACCGCACGATTGGCGACCGTGAGCGGGCCGAAGACCTCGTCCAGGAGGTTTTCATCCGGGTCTTCCGCCACCTGCACCGGTTCGACCAGACCAAGAAATTCTCCACGTGGATCTATACCATCGCCTCGAACCTGGCGAAGAACGAGCTCCGTAACCGCAGTCGCAATCCGCTGGTGCTCTTTCAGACGATCAAGAAAAACTGGGACGCCGATCACCGGCCGCTGCAGTTCGAGGATACGACCGCACGTCCTGACGATCTGTACCGCAAGCGCTTCTTGAAGGATGCGGTGGACCAATGCGTCCGGCGGCTGCCGGAACACCACCGGGAGGTGTTCGTGCTCCGCGAGCTCGAGGGAAAGAGCTACCAGGAGATCGCCGAAATCACCGGGTGCAATTTGGGGACGGTGAAAAGCCGGTTGAACCGGGCACGCAATAGCTTCGCCCAGCTCATCGGCCCCACACTCGTTTAA
PROTEIN sequence
Length: 215
MRTTLKRPTPAVDTTRALQREALHELDDGQVVMRHLAGEPQAFGTLVDRYQTRLLNFVNRTIGDRERAEDLVQEVFIRVFRHLHRFDQTKKFSTWIYTIASNLAKNELRNRSRNPLVLFQTIKKNWDADHRPLQFEDTTARPDDLYRKRFLKDAVDQCVRRLPEHHREVFVLRELEGKSYQEIAEITGCNLGTVKSRLNRARNSFAQLIGPTLV*