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13_1_40cm_4_scaffold_9322_3

Organism: 13_1_40CM_4_Gemmatimonadetes_65_7

partial RP 19 / 55 MC: 6 BSCG 17 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(2577..3809)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 415.0
  • Bit_score: 423
  • Evalue 5.40e-116
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 414.0
  • Bit_score: 455
  • Evalue 5.90e-125
2-isopropylmalate synthase Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 409.0
  • Bit_score: 625
  • Evalue 6.10e-176

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1233
ATGGAAGAGCGGCAGCTGATCTACGATTGGAACAGCGAGTCGGCCGCCAATGGGGGCGGTTTTGATTGGTCGCGCGTCCGCGTCGATCTCAACGACGAGACGCTGCGCGACGGGCTCCAATCGCCCTCCGTGACCGATCCGTCGCTTGACGTCAAAAAGCGGCTCCTGCACCTCATGGCCGATCTGGGCATCGTCGCGGCCGACATTGGCCTTCCCGGCGCCGGCCCTCGCGTCGTCGACCAGGTGCGCGCTTTGGCGACCGAAATCCGCGATCACAAGTTGCCGATCATGCCAAACTGTGCGGCTCGGACTGTGGTCGCCGATGTGGAGCCGATTGTCCGCGTAGTGGACGAGTTGGGAATCAAGATCGAGGCCGCCACGTTTATTGGGTCCTCACCGATCCGCCAGTACGCCGAAGACTGGACGCTCGATCGCATCCTCAAGGCCTCAGAAGAGGCGGTCACGTACGCCGTCTCGCATGGCTTGCCCGTCATGTACGTAACCGAGGATACGACGCGCGCGCGTCCCGAAACACTCAAAGCGTTGTATGGCGCCGCGATTGCGTGCGGTGCCGGGCGGATCTGTCTGGCGGACACGGTCGGGCATGCGACGCCCGATGGTGTAAAGGCTCTCGTCAAGTTTGTGAAAGACGAGATCGTAGGGAGGAGTCCGGTAAAGATCGATTGGCACGGCCATCGCGATCGCGGCATGGGGTTGATCAATTGTCTCGCCGCGATCGAGGCGGGTGTCGATCGTGTGCACGCGACGGCGCTGGGTGTCGGTGAGCGGGTCGGCAACGCCGAGATGGACCTGCTCCTCGTGAACCTCAAGCTTCTGGGCGCGCATCGCCACGACATCCGCCGCCTGCCCGAGTATTGCCGGCTCGTCGCCGATGCGGTCGGCGTGCCAATTCCGGTGAACTATCCCGTGGTAGGCACCGACGCGTTTCGCACGGGCACCGGAGTGCACGCCGCTGCGATTATCAAAGCCAAGAAAAAGGGCCACAACTGGCTTGCGGACCGCGTGTACAGCTCGGTGCCCGCCGAGGAATTCGGCTTCGAGCAGCGCATCGAGATCTCGCCGGTGTCGGGGCTTTCCAACGTGAAGTATTGGCTGGAGCACCACGGCTACGATCCGGAAGACACGGCTGCGTGTCAGAAGCTGTTCGAAGCCGCGAAGCGAACCGATCGCGTGCTCTCCGACCAAGAGTGCCACCGGCTGCTAAAGAAATGA
PROTEIN sequence
Length: 411
MEERQLIYDWNSESAANGGGFDWSRVRVDLNDETLRDGLQSPSVTDPSLDVKKRLLHLMADLGIVAADIGLPGAGPRVVDQVRALATEIRDHKLPIMPNCAARTVVADVEPIVRVVDELGIKIEAATFIGSSPIRQYAEDWTLDRILKASEEAVTYAVSHGLPVMYVTEDTTRARPETLKALYGAAIACGAGRICLADTVGHATPDGVKALVKFVKDEIVGRSPVKIDWHGHRDRGMGLINCLAAIEAGVDRVHATALGVGERVGNAEMDLLLVNLKLLGAHRHDIRRLPEYCRLVADAVGVPIPVNYPVVGTDAFRTGTGVHAAAIIKAKKKGHNWLADRVYSSVPAEEFGFEQRIEISPVSGLSNVKYWLEHHGYDPEDTAACQKLFEAAKRTDRVLSDQECHRLLKK*