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13_1_40cm_4_scaffold_10829_7

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: comp(5112..5657)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GDD3_PROFC similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 169.0
  • Bit_score: 141
  • Evalue 6.40e-31
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium fre similarity UNIPROT
DB: UniProtKB
  • Identity: 45.0
  • Coverage: 169.0
  • Bit_score: 144
  • Evalue 1.10e-31
rpoE; RNA polymerase sigma-70 factor, sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 169.0
  • Bit_score: 141
  • Evalue 1.80e-31

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Taxonomy

Propionibacterium freudenreichii → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGGGGGGCGGAGCGGGGACGGGCGCAGGCGCCGCGCTGGGGCGGGAGGCGTTGGCCTACGTCGACAGCCTGCACAACCTCGCGCGCTACCTGACGGGCAACGCGAGCGACGCCGACGACCTGGTCCAGGAGACGTACGCGCGGGCCCTCAAGGCGGCCGAGCGGTTCACGCCCGGGACGAATCTCAAGGCGTGGCTGTTCAGGATCCTGCGCAACACGTTCCTGAGCGCGTACCGGCGCGAGCGGAACAATCCGGTCAGCGGCGGGCTCGACACCGTGGACCCCGCGGCGCAAGGGGTCGCCGACGACCACTGGCTCCGCGACGACATGGAGCTCGACCGGCTCAGGAAGATCGTGGCCGGGGAGATCGAGGCGGCGCTGATGACGCTGTCGGACGAGGCGCGCACGGTGATCTTGCTGGACCTCGAGGGGCTCACCGAGGTCGAGGTCGCCCAGGTCGTCGGCTGCGCGGTGGGCACCGTGAAGTCACGGCTCGCGCGGGCGCGGTTGGCGCTCCGCCGGCAGCTCAAGGACTACGCGAGATAG
PROTEIN sequence
Length: 182
MGGGAGTGAGAALGREALAYVDSLHNLARYLTGNASDADDLVQETYARALKAAERFTPGTNLKAWLFRILRNTFLSAYRRERNNPVSGGLDTVDPAAQGVADDHWLRDDMELDRLRKIVAGEIEAALMTLSDEARTVILLDLEGLTEVEVAQVVGCAVGTVKSRLARARLALRRQLKDYAR*