ggKbase home page

13_1_40cm_4_scaffold_13869_2

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: 260..1138

Top 3 Functional Annotations

Value Algorithm Source
livM; branched-chain amino acid ABC transporter system, permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 292.0
  • Bit_score: 466
  • Evalue 2.60e-128
Branched-chain amino acid ABC transporter permease protein id=1703897 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 293.0
  • Bit_score: 456
  • Evalue 1.90e-125
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 288.0
  • Bit_score: 235
  • Evalue 1.90e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 879
GTGACAATCGCAGCGCTCGTCCACGTCGTCGTGAGCGGGCTGGCGACCGGCTCGATCTACGCGCTCGTGGCGCTGAGCCTCGTCATCGTCTACAACGCGACGCGCACGCTGAACTTTGCGCAGGGCGAGATGCTGATGGTCTCGACCTTCGCGGGCTTCACGGTCTACGCGCACGTGAAGCTGCCCCTGGTGGTCGTGATGTTGATCGCGGTCGCCGCGGCGGCGCTCCTCGGGTGGGTGATCGAGCGCGTGATCATCCGCCACGCGATCGGGGCGACGCACCTCGACGTGCTGATCATCACCCTCGGCCTGTCGCTCGTGCTGCGCTCGGCGGCCGGCCTCGCGTGGACGCACGACGAGTTCCCGTTCCCGTCGTTCTTCGGGACCCGCCCCATCGTCCTGGGCCCCGTGCGCGTGGCACCCGTGTCGCTCGGGATCATCGGCGCCTCGCTCGCGCTCATGCTCGGCCTCTGGGCGCTCTTCACGCGCACCCGGCTCGGCCGAGCGATGCGCGCGGTCGCTCAGAACCAGCGCGCGGCGCGGCTCGTGGGGATCAGCGTCGAGCGGGTCTACGCGGCGTCGTGGATCCTGGCATCGGTCGTCGGCGCGATCGCCGGCATCCTGATCGCTCCCGTGGTCTTCCTCTCCTCGCAGATGGGCCTCATCGCGATCAACGGCTTCATCGCGGCGGTCCTGGGCGGCTTTGGCTCGATGCCCGGCGCCGTCGTCGGAGGCATGCTGCTCGGCGTGATCGAGAATCTCGCCCCACTCTACCTCCCGTCGTCGATCAAGCACTCGGTGCCCTTCCTCGTGCTGATCGCGATCCTCCTGATCCGTCCGGGCGGCATGCTCGGACGGGTGGTGCGGCGGAAGGTCTGA
PROTEIN sequence
Length: 293
VTIAALVHVVVSGLATGSIYALVALSLVIVYNATRTLNFAQGEMLMVSTFAGFTVYAHVKLPLVVVMLIAVAAAALLGWVIERVIIRHAIGATHLDVLIITLGLSLVLRSAAGLAWTHDEFPFPSFFGTRPIVLGPVRVAPVSLGIIGASLALMLGLWALFTRTRLGRAMRAVAQNQRAARLVGISVERVYAASWILASVVGAIAGILIAPVVFLSSQMGLIAINGFIAAVLGGFGSMPGAVVGGMLLGVIENLAPLYLPSSIKHSVPFLVLIAILLIRPGGMLGRVVRRKV*