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13_1_40cm_4_scaffold_1620_18

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: 16520..18370

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD id=3357851 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 620.0
  • Bit_score: 858
  • Evalue 3.50e-246
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 619.0
  • Bit_score: 858
  • Evalue 4.90e-246
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 632.0
  • Bit_score: 592
  • Evalue 1.30e-166

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Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1851
ATGAGTGAAGAGCCCAAGCTGGAGGAGCTGGACCGGCTGATCACGAGGGGGAAGCAGAAGGGCTTCCTCACCTACGACGAGGTCAACGACGCGCTACCGTCGGACATCGTCTCGCTCGATCAGCTCGACGACATCATGATGATGTTCGGCGCGATGGACATCGAGGTCGTCGACTCCGCGAAGGCGGGACGGCTCCCCTCAGAGGTCGGGCGCGAGCGCCAGCCGGCGCCGGCCGAGGAGGCCGACGACGACGGCCCCGCCGACTCGATCGACCTGACGCCCGGTCCCGTCGGCCGCACCGAGGATCCGGTCCGCCTCTATCTGCGCGAGATGGGCCGCGTCGCCCTCCTGACGCGCGAAGGCGAGATCGCACTCGCCAAGCGGATCGAGGAGGGCAAGAACCAGGTCACCGCCGCCATCCTCTCGACCAACCTCGCCCTCGAGCGCTTCCGCGAGCTGCGCGAGCAGCTCAAGGGCAGCGAGATCTCCATCAAGGAAGTCGTGGACGTCAACGAGGAGGAGTTCACCGAGGAGAAGGAGGATGAGCTCCGGCGGCAGGTGATCGCGGCCTTCGGCACGGTGGATCGGCTCCTCCGCGACCGCGATCGGCTCGTCGCCCAGGCCAAGAAACTCCGGCTCAAGGCCGGTGGCCGGAAGAAGACGAAGAAGGGCAAGGAGCCCGCGTGGCGGCGCCTCGAGATCCAGGCCCACCGGTACCAGGAGAAGGTGCTCGACAACCTCCGCAAGCTCAACATCGGCAACCAGATCATCGACCGCGAGGACGGAGACCCCGGCCGCCGCGGGCTCGTGCAGCGGCTCCGCGACCTCCTCGACGACATCGAGCGCGCCGAGCGTGTGATCAAGCTCTGGACCAACGGTCGACGCCCCTCGCCCGAGGAGGTCCAGAACCTCATCTACGTCTCGTTCCGCGACCCGGGCGTGGGCGCCATCAATGGCCAGGTCGGCGACCTCCACCTCAGGGCCGCCAAGAAGTTCCAGTCGCCCAAGGCGCAGCAGATCTGGGTCGCACAGCAGGAGATCAAGCTCGCCGAGCAGCGCGCCAACGCCAAGGCCGACGAGATCAAGCGCGTGATGACCATCATCCGGCAGGGCCAGGTCAAGGCGGCGCAGGCGAAGAAGGAGATGGTGGAGGCGAACCTGCGCCTCGTCATCTCCATCGCCAAGAAGTACACGAACCGCGGGCTGCAGTTCCTCGACCTCATCCAGGAAGGCAACATCGGCCTCATGAAGGCGGTCGATAAGTTCGAATATCGGCGTGGGTACAAGTTTTCAACCTACGCGACCTGGTGGATCCGGCAGGCGATCACGCGCGCCATCGCCGACCAGGCGCGCACGATCCGGATCCCCGTGCACATGATCGAGACGATCAACAAGCTCATCCGGACCTCGCGGCAGCTCGTGCAGGAGCTCGGCCGCGAGCCCACCCCGGAGGAGATCGCGGCGAAGATGGACGTCCCCGTGGACAAGGTGCGAAAAGTCCTGAAGATCGCGCAAGAGCCGATTTCACTCGAAACACCGATCGGAGAAGAAGAAGACAGCCACCTGGGCGATTTCATAGAGGACAAGCAGGTTGTCTCGCCCGTCGAATCGATCATCGGCCTCTCGCTCCGGGAGCAGACGAACAAGGTCCTCAACACGCTCACCCCGCGCGAGGAGAAGGTGCTGCGGCTCCGCTTCGGCCTCTCCGACGGTTGCGAGCACACGCTGGAGGAGGTCGGGCAGGACTTCGCGGTCACCCGCGAGCGCATCAGACAAATCGAGGCCAAGGCGCTGCGCAAGCTCCGGCACCCATCGCGCTCGAAGAAGCTCCGGAGCTTTCTCGAGACGTGA
PROTEIN sequence
Length: 617
MSEEPKLEELDRLITRGKQKGFLTYDEVNDALPSDIVSLDQLDDIMMMFGAMDIEVVDSAKAGRLPSEVGRERQPAPAEEADDDGPADSIDLTPGPVGRTEDPVRLYLREMGRVALLTREGEIALAKRIEEGKNQVTAAILSTNLALERFRELREQLKGSEISIKEVVDVNEEEFTEEKEDELRRQVIAAFGTVDRLLRDRDRLVAQAKKLRLKAGGRKKTKKGKEPAWRRLEIQAHRYQEKVLDNLRKLNIGNQIIDREDGDPGRRGLVQRLRDLLDDIERAERVIKLWTNGRRPSPEEVQNLIYVSFRDPGVGAINGQVGDLHLRAAKKFQSPKAQQIWVAQQEIKLAEQRANAKADEIKRVMTIIRQGQVKAAQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRQLVQELGREPTPEEIAAKMDVPVDKVRKVLKIAQEPISLETPIGEEEDSHLGDFIEDKQVVSPVESIIGLSLREQTNKVLNTLTPREEKVLRLRFGLSDGCEHTLEEVGQDFAVTRERIRQIEAKALRKLRHPSRSKKLRSFLET*