ggKbase home page

13_1_40cm_4_scaffold_2519_15

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: 11509..13251

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 581.0
  • Bit_score: 993
  • Evalue 1.20e-286
Type IV-A pilus assembly ATPase PilB id=3773045 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 579.0
  • Bit_score: 888
  • Evalue 3.90e-255
type IV-A pilus assembly ATPase PilB similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 569.0
  • Bit_score: 633
  • Evalue 4.90e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1743
ATGGCGCAGGCGCACCAAAAGCTGGGACAACCCGTCAACCGGCGGCTCGGAGACCTGCTCGTCGCCGATGGGCTTCTGACCCCGGCGCAGCTCCAGAAGGCCCTCGGCGAGCAGCGGGGTTCGACCGAGAAGCTCGGCTCGATTCTCATCAAGCTCGGCTTCATCAACGAGGAACAGCTGATCGGGTTCCTCTCCCGCCAGTACGGCGTGCCCTCGATCACGCTCGCCCAGCTCGAGATCGATCCCGCGGTCCTCCGCCTGGTGCCGGCGCCGACCGCGAGGAAGTACGAGGTCATCCCGGTCCGGAAAATGGGCAACTCGCTGGCCGTCGCGATGGCCGACCCGACGAACGTCTTCGCCCTCGACGACATCGCGTTCATGACGAACCTCCAGGTGCTGCCGCTCGTCGCGTCGCAGACGGCGATCCGGAAGGCGATCGACCGCAACTACCAGTCGAAGACCGAGGCGATCGCGAGCGTCATGCAGGACATCTCCTCGGACCTCGCGAACATCGAGGTCGTCGAGGGCGAGGAGGACACCGGCAGCAAGGTCGACGTCTTCGAGCTGAAGGAGTCGGCCGACGAGGCGCCCGTCGTCAAGCTCGTGAACATGGTGCTCGTCGACGCGATCCAGAAGGGTGCCTCGGACGTTCACTTCGAGACGTACGAGAAGGTGTTCCGGATTCGCTTCCGGATGGACGGCGTGCTGCACGAGATGCTCTCCCCACCCAAGCGCCTCGAGTCGGCGATCCTGTCGCGCCTTAAGATCATGTCGAACCTCGACATCGCCGAGCGGCGCCTGCCACAGGACGGGCGGATCAAGCTCAGGTACACGGGCCGCGAGATCGACTTCCGCGTCTCGACCTTACCGACGATCTTCGGCGAGAAGGCGGTCCTCCGCATCCTCGACAAGGACGCGCTGCAGCTCGACCTCACCAAGCTCGGATTCGATCCGTGGAGCCTCGAGAAGTTCAACGCCGTGATCCACCAGCCCTACGGCATGGTCCTCATCACCGGGCCCACCGGCTCGGGGAAGACGACGACCCTCTACTCGGCGATCCACACGATCAACTCGCCGGACGTCAACATCATGACCGCCGAGGACCCGGTCGAGTACAACCTCAAGGGCGTCAACCAGGTGCAGATCAACGAGAGCGTGGGGCGGACCTTCGCCGCCGCGCTCCGCTCGTTCCTGCGCCAGGACCCGGACGTGATCCTGGTCGGCGAGACGCGCGACCTCGAGACGGCGCAGATCTCGATCCGCGCCGCGCTCACCGGCCACCTCGTCTTCACCACGCTCCACACGAACGACTGCCCCTCGACCGTCGCGCGGCTCCTGGACATGGGAATCCCGCCGTTCCTCGTCTCGTCCTCGCTCCTGCTGATCCTGGCCCAACGTCTCGGACGCAAGGTGTGCAGCGCGTGCCGGGAGCCCTACGAGGTCGACCAGCAGACGCTCGTCCCCTACGGCCACACCGCGACCGGGCACGGCAAGGTCACGCTCTACAAGGGCAAGGGCTGCCCGACGTGCAGCTTCACGGGCATGAAGGGGCGGGTGGCGATCTACGAGACCATGCCGATCAGCGAGGAGCTCCGGGACGGGATCCTCCGGAGCGCGACGGCCGCGGAGCTCCAGGAGATCGCGAAGTCGCAGGGCATGAAGACCCTGCGGCAGTCCGGCCTCTTGAAGGTACTCGATGGGACGACGACCATCGAAGAGGTGCTGAGAGTCACGCTCGCCTAG
PROTEIN sequence
Length: 581
MAQAHQKLGQPVNRRLGDLLVADGLLTPAQLQKALGEQRGSTEKLGSILIKLGFINEEQLIGFLSRQYGVPSITLAQLEIDPAVLRLVPAPTARKYEVIPVRKMGNSLAVAMADPTNVFALDDIAFMTNLQVLPLVASQTAIRKAIDRNYQSKTEAIASVMQDISSDLANIEVVEGEEDTGSKVDVFELKESADEAPVVKLVNMVLVDAIQKGASDVHFETYEKVFRIRFRMDGVLHEMLSPPKRLESAILSRLKIMSNLDIAERRLPQDGRIKLRYTGREIDFRVSTLPTIFGEKAVLRILDKDALQLDLTKLGFDPWSLEKFNAVIHQPYGMVLITGPTGSGKTTTLYSAIHTINSPDVNIMTAEDPVEYNLKGVNQVQINESVGRTFAAALRSFLRQDPDVILVGETRDLETAQISIRAALTGHLVFTTLHTNDCPSTVARLLDMGIPPFLVSSSLLLILAQRLGRKVCSACREPYEVDQQTLVPYGHTATGHGKVTLYKGKGCPTCSFTGMKGRVAIYETMPISEELRDGILRSATAAELQEIAKSQGMKTLRQSGLLKVLDGTTTIEEVLRVTLA*